UBA3

 

Full name: ubiquitin like modifier activating enzyme 3 Alias Symbol: hUba3|NAE2
Type: protein-coding gene Cytoband: 3p14.1
Entrez ID: 9039 HGNC ID: HGNC:12470 Ensembl Gene: ENSG00000144744 OMIM ID: 603172
Drug and gene relationship at DGIdb
Screen Evidence:

 

Expression of UBA3:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 UBA3 9039 209115_at -0.3150 0.2567
GSE20347 UBA3 9039 209115_at -0.5340 0.0033
GSE23400 UBA3 9039 209115_at -0.2341 0.0017
GSE26886 UBA3 9039 209115_at -0.8644 0.0000
GSE29001 UBA3 9039 209115_at -0.4236 0.2278
GSE38129 UBA3 9039 209115_at -0.4582 0.0001
GSE45670 UBA3 9039 209115_at -0.2653 0.0396
GSE53622 UBA3 9039 75397 -0.2220 0.0001
GSE53624 UBA3 9039 75397 -0.5262 0.0000
GSE63941 UBA3 9039 209115_at -0.6336 0.0949
GSE77861 UBA3 9039 209115_at -0.4951 0.2006
GSE97050 UBA3 9039 A_23_P211840 0.1330 0.5115
SRP007169 UBA3 9039 RNAseq -1.2871 0.0008
SRP008496 UBA3 9039 RNAseq -0.9358 0.0000
SRP064894 UBA3 9039 RNAseq -0.5643 0.0019
SRP133303 UBA3 9039 RNAseq -0.2321 0.1419
SRP159526 UBA3 9039 RNAseq -0.7490 0.0001
SRP193095 UBA3 9039 RNAseq -0.6235 0.0000
SRP219564 UBA3 9039 RNAseq -0.8982 0.0001
TCGA UBA3 9039 RNAseq -0.0420 0.3976

Upregulated datasets: 0; Downregulated datasets: 1.  


 

Survival by UBA3 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of UBA3:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 UBA3 9039 1 19 10
GSE20123 UBA3 9039 1 19 10
GSE43470 UBA3 9039 0 20 23
GSE46452 UBA3 9039 2 17 40
GSE47630 UBA3 9039 1 23 16
GSE54993 UBA3 9039 5 3 62
GSE54994 UBA3 9039 1 33 19
GSE60625 UBA3 9039 3 1 7
GSE74703 UBA3 9039 0 16 20
GSE74704 UBA3 9039 1 13 6
TCGA UBA3 9039 0 79 17

Total number of gains: 15; Total number of losses: 243; Total Number of normals: 230.  


 

Somatic mutations of UBA3:

 

Generating mutation plots.

 

Highly correlated genes for UBA3:

 

Showing top 20/1156 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
UBA3RWDD2B0.837231303
UBA3SARNP0.815984303
UBA3UNC5CL0.789419303
UBA3SYTL40.786712303
UBA3IER3IP10.772869303
UBA3ZNF4160.77187303
UBA3HECW20.75124303
UBA3CCDC250.74838303
UBA3HDHD20.738985404
UBA3MTA30.737918404
UBA3NDUFA100.734661403
UBA3NUP540.731175303
UBA3METTL140.730787404
UBA3RAB210.727361403
UBA3RCOR10.726732403
UBA3SACM1L0.72064112011
UBA3A2ML10.716293505
UBA3NAA350.710323403
UBA3LYSMD30.709936505
UBA3THOC70.70989312011

For details and further investigation, click here