FIG4

 

Full name: FIG4 phosphoinositide 5-phosphatase Alias Symbol: SAC3|hSac3|dJ249I4.1|ALS11|CMT4J
Type: protein-coding gene Cytoband: 6q21
Entrez ID: 9896 HGNC ID: HGNC:16873 Ensembl Gene: ENSG00000112367 OMIM ID: 609390
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of FIG4:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 FIG4 9896 203656_at -0.8611 0.0331
GSE20347 FIG4 9896 203656_at -0.8167 0.0000
GSE23400 FIG4 9896 203656_at -0.2925 0.0000
GSE26886 FIG4 9896 203656_at -0.6368 0.0018
GSE29001 FIG4 9896 203656_at -0.5783 0.0519
GSE38129 FIG4 9896 203656_at -0.7286 0.0000
GSE45670 FIG4 9896 203656_at -0.6621 0.0004
GSE53622 FIG4 9896 37877 -0.7738 0.0000
GSE53624 FIG4 9896 54755 -0.8212 0.0000
GSE63941 FIG4 9896 203656_at -1.0540 0.0412
GSE77861 FIG4 9896 203656_at -0.8287 0.0028
GSE97050 FIG4 9896 A_33_P3337981 -0.3284 0.1785
SRP007169 FIG4 9896 RNAseq -1.0289 0.0035
SRP008496 FIG4 9896 RNAseq -0.7354 0.0038
SRP064894 FIG4 9896 RNAseq -0.4289 0.0013
SRP133303 FIG4 9896 RNAseq -0.5678 0.0005
SRP159526 FIG4 9896 RNAseq -0.6945 0.0029
SRP193095 FIG4 9896 RNAseq -0.8466 0.0000
SRP219564 FIG4 9896 RNAseq -0.5694 0.0410
TCGA FIG4 9896 RNAseq -0.2641 0.0001

Upregulated datasets: 0; Downregulated datasets: 2.  


 

Survival by FIG4 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of FIG4:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 FIG4 9896 2 3 25
GSE20123 FIG4 9896 2 2 26
GSE43470 FIG4 9896 3 1 39
GSE46452 FIG4 9896 2 11 46
GSE47630 FIG4 9896 9 4 27
GSE54993 FIG4 9896 3 2 65
GSE54994 FIG4 9896 8 8 37
GSE60625 FIG4 9896 0 2 9
GSE74703 FIG4 9896 2 1 33
GSE74704 FIG4 9896 0 0 20
TCGA FIG4 9896 6 24 66

Total number of gains: 37; Total number of losses: 58; Total Number of normals: 393.  


 

Somatic mutations of FIG4:

 

Generating mutation plots.

 

Highly correlated genes for FIG4:

 

Showing top 20/1478 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
FIG4GALNT110.779836404
FIG4ELL30.760377303
FIG4SLC35B30.752694303
FIG4TRA2A0.750188303
FIG4PAQR80.736863707
FIG4TSPAN310.736139404
FIG4LIFR0.731133505
FIG4ZCCHC100.724697303
FIG4ATP11B0.722856404
FIG4NDUFV30.721017303
FIG4GBGT10.71504303
FIG4EIF4E30.712807706
FIG4CAPN70.712713707
FIG4AK90.711677606
FIG4FAM149B10.70977411010
FIG4SMDT10.70933505
FIG4CGNL10.703808706
FIG4MACROD20.701111404
FIG4MAP60.699871303
FIG4KBTBD30.699661303

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