FOXD3

 

Full name: forkhead box D3 Alias Symbol: Genesis|HFH2
Type: protein-coding gene Cytoband: 1p31.3
Entrez ID: 27022 HGNC ID: HGNC:3804 Ensembl Gene: ENSG00000187140 OMIM ID: 611539
Drug and gene relationship at DGIdb

 

Expression of FOXD3:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 FOXD3 27022 241609_at 0.0358 0.9174
GSE20347 FOXD3 27022 208500_x_at -0.0599 0.2193
GSE23400 FOXD3 27022 208500_x_at -0.1097 0.0002
GSE26886 FOXD3 27022 241609_at 0.5006 0.0004
GSE29001 FOXD3 27022 208500_x_at -0.1649 0.0563
GSE38129 FOXD3 27022 208500_x_at -0.0357 0.4248
GSE45670 FOXD3 27022 241609_at 0.0830 0.4602
GSE53622 FOXD3 27022 122444 -0.4630 0.1284
GSE53624 FOXD3 27022 122444 -0.0655 0.7845
GSE63941 FOXD3 27022 241612_at 0.3286 0.3155
GSE77861 FOXD3 27022 241609_at -0.0025 0.9887
SRP159526 FOXD3 27022 RNAseq 3.0677 0.0001
SRP219564 FOXD3 27022 RNAseq 0.6573 0.5281
TCGA FOXD3 27022 RNAseq 0.5546 0.1703

Upregulated datasets: 1; Downregulated datasets: 0.  


 

Survival by FOXD3 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of FOXD3:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 FOXD3 27022 3 6 21
GSE20123 FOXD3 27022 3 5 22
GSE43470 FOXD3 27022 5 4 34
GSE46452 FOXD3 27022 1 1 57
GSE47630 FOXD3 27022 8 5 27
GSE54993 FOXD3 27022 0 0 70
GSE54994 FOXD3 27022 6 4 43
GSE60625 FOXD3 27022 0 0 11
GSE74703 FOXD3 27022 4 3 29
GSE74704 FOXD3 27022 2 2 16
TCGA FOXD3 27022 10 20 66

Total number of gains: 42; Total number of losses: 50; Total Number of normals: 396.  


 

Somatic mutations of FOXD3:

 

Generating mutation plots.

 

Highly correlated genes for FOXD3:

 

Showing top 20/241 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
FOXD3S1PR20.676281303
FOXD3C20orf1410.649819303
FOXD3TP53TG50.644862404
FOXD3ART10.644586303
FOXD3GTPBP100.643209303
FOXD3IL17F0.641702303
FOXD3DPEP10.640559303
FOXD3GRAP0.637371303
FOXD3CHD50.63564403
FOXD3CHST130.634078403
FOXD3NSMF0.633443404
FOXD3EXTL10.631446404
FOXD3KCNG20.63039303
FOXD3DZIP1L0.627508303
FOXD3PGK20.627264303
FOXD3HDAC100.626263403
FOXD3CCL70.623515303
FOXD3C9orf1160.621713505
FOXD3JSRP10.620832403
FOXD3TFEB0.615264403

For details and further investigation, click here