GCC2

 

Full name: GRIP and coiled-coil domain containing 2 Alias Symbol: GCC185|KIAA0336
Type: protein-coding gene Cytoband: 2q12.3
Entrez ID: 9648 HGNC ID: HGNC:23218 Ensembl Gene: ENSG00000135968 OMIM ID: 612711
Drug and gene relationship at DGIdb

 

Expression of GCC2:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 GCC2 9648 202832_at -0.4296 0.1219
GSE20347 GCC2 9648 202832_at -0.3411 0.0308
GSE23400 GCC2 9648 202832_at -0.0900 0.3099
GSE26886 GCC2 9648 202832_at -0.7037 0.0143
GSE29001 GCC2 9648 202832_at -0.1301 0.6981
GSE38129 GCC2 9648 202832_at -0.4181 0.0041
GSE45670 GCC2 9648 202832_at -0.4552 0.0018
GSE53622 GCC2 9648 18570 -0.2271 0.0005
GSE53624 GCC2 9648 9386 -0.3800 0.0000
GSE63941 GCC2 9648 202832_at -1.4018 0.0631
GSE77861 GCC2 9648 202832_at -0.0441 0.9226
GSE97050 GCC2 9648 A_33_P3247933 -0.3749 0.1590
SRP007169 GCC2 9648 RNAseq -0.5448 0.1184
SRP008496 GCC2 9648 RNAseq -0.2517 0.2650
SRP064894 GCC2 9648 RNAseq -0.3136 0.2230
SRP133303 GCC2 9648 RNAseq 0.0853 0.5304
SRP159526 GCC2 9648 RNAseq -0.1063 0.6368
SRP193095 GCC2 9648 RNAseq -0.5045 0.0063
SRP219564 GCC2 9648 RNAseq -0.4649 0.1734
TCGA GCC2 9648 RNAseq -0.3515 0.0000

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by GCC2 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of GCC2:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 GCC2 9648 3 2 25
GSE20123 GCC2 9648 3 2 25
GSE43470 GCC2 9648 3 1 39
GSE46452 GCC2 9648 1 4 54
GSE47630 GCC2 9648 7 0 33
GSE54993 GCC2 9648 0 6 64
GSE54994 GCC2 9648 10 0 43
GSE60625 GCC2 9648 0 3 8
GSE74703 GCC2 9648 3 1 32
GSE74704 GCC2 9648 2 2 16
TCGA GCC2 9648 31 6 59

Total number of gains: 63; Total number of losses: 27; Total Number of normals: 398.  


 

Somatic mutations of GCC2:

 

Generating mutation plots.

 

Highly correlated genes for GCC2:

 

Showing top 20/829 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
GCC2ZNF6380.792078303
GCC2KIAA11910.77125303
GCC2PNPLA80.767414303
GCC2HDHD20.756167303
GCC2QRICH10.746889303
GCC2RNF1850.743205303
GCC2STAU20.742212303
GCC2SLC35B30.738699404
GCC2PLEKHH20.737902303
GCC2LNPEP0.736194303
GCC2ALKBH70.728279303
GCC2CDC260.725669303
GCC2RWDD2B0.722886303
GCC2CNOT40.720921303
GCC2ZNF6490.717267303
GCC2RSRC20.712115403
GCC2ZNF8000.709826303
GCC2BDP10.709493303
GCC2NPY1R0.708681403
GCC2COG30.704652404

For details and further investigation, click here