GID4

 

Full name: GID complex subunit 4 homolog Alias Symbol: VID24
Type: protein-coding gene Cytoband: 17p11.2
Entrez ID: 79018 HGNC ID: HGNC:28453 Ensembl Gene: ENSG00000141034 OMIM ID: 617699
Drug and gene relationship at DGIdb

 

Expression of GID4:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 GID4 79018 228452_at -0.8966 0.0306
GSE20347 GID4 79018 220058_at -0.3943 0.0061
GSE23400 GID4 79018 220058_at -0.1890 0.0000
GSE26886 GID4 79018 228452_at -0.9173 0.0002
GSE29001 GID4 79018 220058_at -0.6266 0.0323
GSE38129 GID4 79018 220058_at -0.2294 0.1047
GSE45670 GID4 79018 228452_at -0.6221 0.0001
GSE53622 GID4 79018 11931 -0.8783 0.0000
GSE53624 GID4 79018 11931 -0.8798 0.0000
GSE63941 GID4 79018 228452_at -0.6879 0.2632
GSE77861 GID4 79018 228452_at -0.4190 0.0187
SRP007169 GID4 79018 RNAseq -1.6016 0.0023
SRP008496 GID4 79018 RNAseq -1.5378 0.0000
SRP064894 GID4 79018 RNAseq -0.3972 0.0544
SRP133303 GID4 79018 RNAseq -0.6156 0.0010
SRP159526 GID4 79018 RNAseq -0.4951 0.0756
SRP193095 GID4 79018 RNAseq -0.6857 0.0000
SRP219564 GID4 79018 RNAseq -0.9595 0.0272

Upregulated datasets: 0; Downregulated datasets: 2.  


 

Survival by GID4 expression:

 

GSE53622GSE53624

 

Note: Click image to view full size file.  


Copy number change of GID4:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 GID4 79018 3 3 24
GSE20123 GID4 79018 3 4 23
GSE43470 GID4 79018 1 5 37
GSE46452 GID4 79018 34 1 24
GSE47630 GID4 79018 7 1 32
GSE54993 GID4 79018 3 3 64
GSE54994 GID4 79018 6 6 41
GSE60625 GID4 79018 4 0 7
GSE74703 GID4 79018 1 2 33
GSE74704 GID4 79018 2 1 17
TCGA GID4 79018 18 23 55

Total number of gains: 82; Total number of losses: 49; Total Number of normals: 357.  


 

Somatic mutations of GID4:

 

Generating mutation plots.

 

Highly correlated genes for GID4:

 

Showing top 20/1208 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
GID4ZNF6620.744732606
GID4MPP70.735902606
GID4CIPC0.72925606
GID4STRADB0.717185606
GID4SLMAP0.715714606
GID4SH3BGRL20.715368606
GID4FBXL30.71454404
GID4FCHO20.711788606
GID4GBP60.709396404
GID4SNORA680.707066404
GID4MRPS360.706751606
GID4BDH20.70566303
GID4KRT780.705014606
GID4SAMD50.704959606
GID4MKNK20.703658505
GID4SMIM50.695541505
GID4TP53INP20.693649605
GID4CAST0.690733908
GID4ZNF4160.688753303
GID4SNX210.687537404

For details and further investigation, click here