| Full name: CLOCK interacting pacemaker | Alias Symbol: | ||
| Type: protein-coding gene | Cytoband: 14q24.3 | ||
| Entrez ID: 85457 | HGNC ID: HGNC:20365 | Ensembl Gene: ENSG00000198894 | OMIM ID: 616995 |
Expression of CIPC:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | CIPC | 85457 | 225623_at | -0.8148 | 0.0658 | |
| GSE26886 | CIPC | 85457 | 225623_at | -1.1531 | 0.0009 | |
| GSE45670 | CIPC | 85457 | 225623_at | -0.8713 | 0.0001 | |
| GSE53622 | CIPC | 85457 | 8927 | -1.1249 | 0.0000 | |
| GSE53624 | CIPC | 85457 | 8927 | -1.2362 | 0.0000 | |
| GSE63941 | CIPC | 85457 | 225623_at | -0.2660 | 0.5201 | |
| GSE77861 | CIPC | 85457 | 225623_at | -0.9267 | 0.0108 | |
| SRP007169 | CIPC | 85457 | RNAseq | -1.2341 | 0.0012 | |
| SRP008496 | CIPC | 85457 | RNAseq | -1.1305 | 0.0000 | |
| SRP064894 | CIPC | 85457 | RNAseq | -1.0821 | 0.0000 | |
| SRP133303 | CIPC | 85457 | RNAseq | -0.9121 | 0.0000 | |
| SRP159526 | CIPC | 85457 | RNAseq | -0.8350 | 0.0000 | |
| SRP193095 | CIPC | 85457 | RNAseq | -1.1648 | 0.0000 | |
| SRP219564 | CIPC | 85457 | RNAseq | -0.9665 | 0.0082 |
Upregulated datasets: 0; Downregulated datasets: 7.
Survival by CIPC expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of CIPC:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | CIPC | 85457 | 8 | 3 | 19 | |
| GSE20123 | CIPC | 85457 | 8 | 3 | 19 | |
| GSE43470 | CIPC | 85457 | 8 | 3 | 32 | |
| GSE46452 | CIPC | 85457 | 16 | 3 | 40 | |
| GSE47630 | CIPC | 85457 | 11 | 8 | 21 | |
| GSE54993 | CIPC | 85457 | 3 | 8 | 59 | |
| GSE54994 | CIPC | 85457 | 19 | 4 | 30 | |
| GSE60625 | CIPC | 85457 | 0 | 2 | 9 | |
| GSE74703 | CIPC | 85457 | 7 | 3 | 26 | |
| GSE74704 | CIPC | 85457 | 3 | 3 | 14 |
Total number of gains: 83; Total number of losses: 40; Total Number of normals: 269.
Somatic mutations of CIPC:
Generating mutation plots.
Highly correlated genes for CIPC:
Showing top 20/1260 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| CIPC | GPD1L | 0.768845 | 6 | 0 | 6 |
| CIPC | TRIM13 | 0.766067 | 6 | 0 | 6 |
| CIPC | CPEB3 | 0.758222 | 5 | 0 | 5 |
| CIPC | KIAA0232 | 0.752782 | 6 | 0 | 6 |
| CIPC | RBM20 | 0.749889 | 4 | 0 | 4 |
| CIPC | CAB39L | 0.746419 | 6 | 0 | 6 |
| CIPC | UBL3 | 0.741837 | 6 | 0 | 6 |
| CIPC | SH3BGRL2 | 0.741835 | 6 | 0 | 6 |
| CIPC | WDR26 | 0.739194 | 5 | 0 | 5 |
| CIPC | LNX1 | 0.738127 | 6 | 0 | 6 |
| CIPC | HBP1 | 0.737095 | 4 | 0 | 4 |
| CIPC | ISOC1 | 0.736532 | 6 | 0 | 6 |
| CIPC | MPC1 | 0.733665 | 6 | 0 | 6 |
| CIPC | MAL2 | 0.732379 | 4 | 0 | 4 |
| CIPC | HECTD1 | 0.730638 | 5 | 0 | 5 |
| CIPC | MKRN2 | 0.729741 | 4 | 0 | 4 |
| CIPC | GID4 | 0.72925 | 6 | 0 | 6 |
| CIPC | FYCO1 | 0.728774 | 6 | 0 | 5 |
| CIPC | OXR1 | 0.727377 | 6 | 0 | 6 |
| CIPC | LMBRD1 | 0.723944 | 6 | 0 | 6 |
For details and further investigation, click here
