GRAMD1B

 

Full name: GRAM domain containing 1B Alias Symbol: KIAA1201
Type: protein-coding gene Cytoband: 11q24.1
Entrez ID: 57476 HGNC ID: HGNC:29214 Ensembl Gene: ENSG00000023171 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of GRAMD1B:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 GRAMD1B 57476 212906_at -0.0039 0.9905
GSE20347 GRAMD1B 57476 212906_at 0.0751 0.3773
GSE23400 GRAMD1B 57476 212906_at -0.0532 0.1912
GSE26886 GRAMD1B 57476 212906_at 0.1067 0.4154
GSE29001 GRAMD1B 57476 212906_at -0.1000 0.5878
GSE38129 GRAMD1B 57476 212906_at -0.0899 0.3714
GSE45670 GRAMD1B 57476 212906_at 0.2415 0.0049
GSE53622 GRAMD1B 57476 62006 0.3567 0.0075
GSE53624 GRAMD1B 57476 62006 0.4326 0.0022
GSE63941 GRAMD1B 57476 212906_at 0.1738 0.5243
GSE77861 GRAMD1B 57476 212906_at 0.0460 0.6203
GSE97050 GRAMD1B 57476 A_24_P58620 0.3890 0.2921
SRP007169 GRAMD1B 57476 RNAseq 0.7102 0.4288
SRP064894 GRAMD1B 57476 RNAseq 1.0811 0.0001
SRP133303 GRAMD1B 57476 RNAseq 0.4494 0.0609
SRP159526 GRAMD1B 57476 RNAseq 0.0506 0.9198
SRP193095 GRAMD1B 57476 RNAseq -0.3753 0.4382
TCGA GRAMD1B 57476 RNAseq -1.4884 0.0000

Upregulated datasets: 1; Downregulated datasets: 1.  

 

Survival by GRAMD1B expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  

Copy number change of GRAMD1B:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 GRAMD1B 57476 0 13 17
GSE20123 GRAMD1B 57476 0 13 17
GSE43470 GRAMD1B 57476 2 7 34
GSE46452 GRAMD1B 57476 3 26 30
GSE47630 GRAMD1B 57476 2 19 19
GSE54993 GRAMD1B 57476 10 0 60
GSE54994 GRAMD1B 57476 5 19 29
GSE60625 GRAMD1B 57476 0 3 8
GSE74703 GRAMD1B 57476 1 5 30
GSE74704 GRAMD1B 57476 0 9 11
TCGA GRAMD1B 57476 6 50 40

Total number of gains: 29; Total number of losses: 164; Total Number of normals: 295.  

 

Somatic mutations of GRAMD1B:

 

Generating mutation plots.

 

Highly correlated genes for GRAMD1B:

 

Showing top 20/442 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
GRAMD1BPRLR0.711934303
GRAMD1BPDE3B0.706378303
GRAMD1BGALNT20.698732303
GRAMD1BPHLDB10.68996404
GRAMD1BUSP50.688278303
GRAMD1BITGB30.686273303
GRAMD1BZYX0.68345303
GRAMD1BCNTF0.678384303
GRAMD1BGTPBP30.67233303
GRAMD1BOAS20.672289303
GRAMD1BGSDMB0.663442303
GRAMD1BNFAM10.66122303
GRAMD1BSUSD10.660262303
GRAMD1BPTPN10.65201303
GRAMD1BPEAK10.651415404
GRAMD1BCCDC90.650632404
GRAMD1BQPCTL0.644592504
GRAMD1BRFPL20.640085303
GRAMD1BADAM110.639107404
GRAMD1BOR10J10.637465404

For details and further investigation, click here