| Full name: homeobox A4 | Alias Symbol: | ||
| Type: protein-coding gene | Cytoband: 7p15.2 | ||
| Entrez ID: 3201 | HGNC ID: HGNC:5105 | Ensembl Gene: ENSG00000197576 | OMIM ID: 142953 |
| Drug and gene relationship at DGIdb | |||
Expression of HOXA4:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | HOXA4 | 3201 | 206289_at | -0.6742 | 0.1616 | |
| GSE20347 | HOXA4 | 3201 | 206289_at | -0.3880 | 0.0020 | |
| GSE23400 | HOXA4 | 3201 | 206289_at | -0.3277 | 0.0000 | |
| GSE26886 | HOXA4 | 3201 | 206289_at | 0.0573 | 0.7445 | |
| GSE29001 | HOXA4 | 3201 | 206289_at | -0.3287 | 0.1194 | |
| GSE38129 | HOXA4 | 3201 | 206289_at | -0.5851 | 0.0002 | |
| GSE45670 | HOXA4 | 3201 | 206289_at | -0.6933 | 0.0000 | |
| GSE63941 | HOXA4 | 3201 | 206289_at | -0.1720 | 0.7575 | |
| GSE77861 | HOXA4 | 3201 | 206289_at | -0.2414 | 0.0750 | |
| GSE97050 | HOXA4 | 3201 | A_33_P3377529 | -1.2349 | 0.0885 | |
| SRP064894 | HOXA4 | 3201 | RNAseq | -0.6718 | 0.0055 | |
| SRP133303 | HOXA4 | 3201 | RNAseq | -0.7844 | 0.0083 | |
| SRP159526 | HOXA4 | 3201 | RNAseq | -0.8011 | 0.0104 | |
| SRP219564 | HOXA4 | 3201 | RNAseq | -0.6734 | 0.2570 | |
| TCGA | HOXA4 | 3201 | RNAseq | 0.1116 | 0.4529 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by HOXA4 expression:
 |
| TCGA |
Note: Click image to view full size file.
Copy number change of HOXA4:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | HOXA4 | 3201 | 16 | 1 | 13 | |
| GSE20123 | HOXA4 | 3201 | 16 | 1 | 13 | |
| GSE43470 | HOXA4 | 3201 | 4 | 0 | 39 | |
| GSE46452 | HOXA4 | 3201 | 10 | 2 | 47 | |
| GSE47630 | HOXA4 | 3201 | 8 | 1 | 31 | |
| GSE54993 | HOXA4 | 3201 | 0 | 6 | 64 | |
| GSE54994 | HOXA4 | 3201 | 21 | 2 | 30 | |
| GSE60625 | HOXA4 | 3201 | 0 | 0 | 11 | |
| GSE74703 | HOXA4 | 3201 | 4 | 0 | 32 | |
| GSE74704 | HOXA4 | 3201 | 10 | 1 | 9 | |
| TCGA | HOXA4 | 3201 | 54 | 7 | 35 |
Total number of gains: 143; Total number of losses: 21; Total Number of normals: 324.
Somatic mutations of HOXA4:
Generating mutation plots.
Highly correlated genes for HOXA4:
Showing top 20/1194 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| HOXA4 | C1QTNF7 | 0.874544 | 3 | 0 | 3 |
| HOXA4 | GFRA1 | 0.863784 | 3 | 0 | 3 |
| HOXA4 | STARD9 | 0.836229 | 3 | 0 | 3 |
| HOXA4 | ASB5 | 0.817118 | 3 | 0 | 3 |
| HOXA4 | XKR4 | 0.816383 | 3 | 0 | 3 |
| HOXA4 | CFL2 | 0.810284 | 3 | 0 | 3 |
| HOXA4 | RAB9B | 0.796134 | 3 | 0 | 3 |
| HOXA4 | MAMDC2 | 0.794167 | 3 | 0 | 3 |
| HOXA4 | WBP4 | 0.793433 | 3 | 0 | 3 |
| HOXA4 | ANO5 | 0.79004 | 3 | 0 | 3 |
| HOXA4 | PARD3B | 0.786162 | 3 | 0 | 3 |
| HOXA4 | ADRB3 | 0.780115 | 3 | 0 | 3 |
| HOXA4 | RNASE4 | 0.779186 | 6 | 0 | 6 |
| HOXA4 | SEMA3E | 0.778737 | 4 | 0 | 4 |
| HOXA4 | CASQ2 | 0.772332 | 6 | 0 | 6 |
| HOXA4 | KLHDC1 | 0.771246 | 3 | 0 | 3 |
| HOXA4 | ADAMTSL1 | 0.770207 | 3 | 0 | 3 |
| HOXA4 | ADD1 | 0.769682 | 6 | 0 | 6 |
| HOXA4 | TMOD1 | 0.769068 | 6 | 0 | 6 |
| HOXA4 | SORBS2 | 0.768028 | 7 | 0 | 7 |
For details and further investigation, click here
