| Full name: homeobox C11 | Alias Symbol: | ||
| Type: protein-coding gene | Cytoband: 12q13.13 | ||
| Entrez ID: 3227 | HGNC ID: HGNC:5123 | Ensembl Gene: ENSG00000123388 | OMIM ID: 605559 |
Expression of HOXC11:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | HOXC11 | 3227 | 206745_at | 0.2997 | 0.1873 | |
| GSE20347 | HOXC11 | 3227 | 206745_at | 0.2211 | 0.0114 | |
| GSE23400 | HOXC11 | 3227 | 206745_at | 0.0302 | 0.5779 | |
| GSE26886 | HOXC11 | 3227 | 206745_at | -0.0150 | 0.9246 | |
| GSE29001 | HOXC11 | 3227 | 206745_at | 0.0376 | 0.8695 | |
| GSE38129 | HOXC11 | 3227 | 206745_at | 0.2429 | 0.0152 | |
| GSE45670 | HOXC11 | 3227 | 206745_at | 0.3073 | 0.0140 | |
| GSE63941 | HOXC11 | 3227 | 206745_at | 1.3337 | 0.0012 | |
| GSE77861 | HOXC11 | 3227 | 206745_at | 0.0806 | 0.4172 | |
| SRP159526 | HOXC11 | 3227 | RNAseq | 9.5623 | 0.0000 | |
| SRP219564 | HOXC11 | 3227 | RNAseq | 8.6255 | 0.0000 | |
| TCGA | HOXC11 | 3227 | RNAseq | 4.2289 | 0.0000 |
Upregulated datasets: 4; Downregulated datasets: 0.
Survival by HOXC11 expression:
 |
| TCGA |
Note: Click image to view full size file.
Copy number change of HOXC11:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | HOXC11 | 3227 | 4 | 1 | 25 | |
| GSE20123 | HOXC11 | 3227 | 4 | 1 | 25 | |
| GSE43470 | HOXC11 | 3227 | 3 | 0 | 40 | |
| GSE46452 | HOXC11 | 3227 | 7 | 1 | 51 | |
| GSE47630 | HOXC11 | 3227 | 10 | 2 | 28 | |
| GSE54993 | HOXC11 | 3227 | 0 | 5 | 65 | |
| GSE54994 | HOXC11 | 3227 | 4 | 1 | 48 | |
| GSE60625 | HOXC11 | 3227 | 0 | 0 | 11 | |
| GSE74703 | HOXC11 | 3227 | 3 | 0 | 33 | |
| GSE74704 | HOXC11 | 3227 | 3 | 1 | 16 | |
| TCGA | HOXC11 | 3227 | 15 | 11 | 70 |
Total number of gains: 53; Total number of losses: 23; Total Number of normals: 412.
Somatic mutations of HOXC11:
Generating mutation plots.
Highly correlated genes for HOXC11:
Showing top 20/350 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| HOXC11 | IMPDH1 | 0.662385 | 3 | 0 | 3 |
| HOXC11 | FOXL2 | 0.66157 | 3 | 0 | 3 |
| HOXC11 | PRKCG | 0.651798 | 3 | 0 | 3 |
| HOXC11 | OR1F1 | 0.642476 | 4 | 0 | 4 |
| HOXC11 | GIGYF1 | 0.628254 | 3 | 0 | 3 |
| HOXC11 | FABP7 | 0.627193 | 3 | 0 | 3 |
| HOXC11 | PRKCI | 0.627068 | 3 | 0 | 3 |
| HOXC11 | BCL7A | 0.626519 | 4 | 0 | 3 |
| HOXC11 | IKBKG | 0.626458 | 3 | 0 | 3 |
| HOXC11 | SMG7 | 0.625205 | 3 | 0 | 3 |
| HOXC11 | PRR34 | 0.624033 | 4 | 0 | 4 |
| HOXC11 | RNF185-AS1 | 0.613965 | 4 | 0 | 4 |
| HOXC11 | TMEM63B | 0.611496 | 3 | 0 | 3 |
| HOXC11 | SPC25 | 0.608344 | 3 | 0 | 3 |
| HOXC11 | HOXC13 | 0.60729 | 8 | 0 | 6 |
| HOXC11 | SPTA1 | 0.606956 | 3 | 0 | 3 |
| HOXC11 | IRF6 | 0.606463 | 5 | 0 | 3 |
| HOXC11 | FADS3 | 0.606304 | 3 | 0 | 3 |
| HOXC11 | KLF16 | 0.603974 | 4 | 0 | 3 |
| HOXC11 | HOXC9 | 0.60377 | 4 | 0 | 3 |
For details and further investigation, click here
