| Full name: homeobox C13 | Alias Symbol: | ||
| Type: protein-coding gene | Cytoband: 12q13.13 | ||
| Entrez ID: 3229 | HGNC ID: HGNC:5125 | Ensembl Gene: ENSG00000123364 | OMIM ID: 142976 |
| Drug and gene relationship at DGIdb | |||
Expression of HOXC13:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | HOXC13 | 3229 | 219832_s_at | 1.1906 | 0.0083 | |
| GSE20347 | HOXC13 | 3229 | 219832_s_at | 0.3458 | 0.0072 | |
| GSE23400 | HOXC13 | 3229 | 219832_s_at | 0.0376 | 0.4535 | |
| GSE26886 | HOXC13 | 3229 | 219832_s_at | 0.8635 | 0.0001 | |
| GSE29001 | HOXC13 | 3229 | 219832_s_at | 0.6421 | 0.0409 | |
| GSE38129 | HOXC13 | 3229 | 219832_s_at | 0.4202 | 0.0002 | |
| GSE45670 | HOXC13 | 3229 | 219832_s_at | 0.8583 | 0.0030 | |
| GSE53622 | HOXC13 | 3229 | 126836 | 4.1413 | 0.0000 | |
| GSE53624 | HOXC13 | 3229 | 68648 | 4.0317 | 0.0000 | |
| GSE63941 | HOXC13 | 3229 | 219832_s_at | 2.0573 | 0.0052 | |
| GSE77861 | HOXC13 | 3229 | 219832_s_at | 0.2500 | 0.1069 | |
| SRP133303 | HOXC13 | 3229 | RNAseq | 4.5523 | 0.0000 | |
| SRP159526 | HOXC13 | 3229 | RNAseq | 4.9599 | 0.0000 | |
| SRP219564 | HOXC13 | 3229 | RNAseq | 5.7684 | 0.0000 | |
| TCGA | HOXC13 | 3229 | RNAseq | 2.2183 | 0.0000 |
Upregulated datasets: 8; Downregulated datasets: 0.
Survival by HOXC13 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of HOXC13:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | HOXC13 | 3229 | 4 | 1 | 25 | |
| GSE20123 | HOXC13 | 3229 | 4 | 1 | 25 | |
| GSE43470 | HOXC13 | 3229 | 3 | 0 | 40 | |
| GSE46452 | HOXC13 | 3229 | 7 | 1 | 51 | |
| GSE47630 | HOXC13 | 3229 | 10 | 2 | 28 | |
| GSE54993 | HOXC13 | 3229 | 0 | 5 | 65 | |
| GSE54994 | HOXC13 | 3229 | 4 | 1 | 48 | |
| GSE60625 | HOXC13 | 3229 | 0 | 0 | 11 | |
| GSE74703 | HOXC13 | 3229 | 3 | 0 | 33 | |
| GSE74704 | HOXC13 | 3229 | 3 | 1 | 16 | |
| TCGA | HOXC13 | 3229 | 15 | 12 | 69 |
Total number of gains: 53; Total number of losses: 24; Total Number of normals: 411.
Somatic mutations of HOXC13:
Generating mutation plots.
Highly correlated genes for HOXC13:
Showing top 20/1187 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| HOXC13 | ATG2A | 0.730038 | 3 | 0 | 3 |
| HOXC13 | INTS1 | 0.727744 | 3 | 0 | 3 |
| HOXC13 | TMEM63B | 0.718526 | 3 | 0 | 3 |
| HOXC13 | PTK7 | 0.705968 | 7 | 0 | 7 |
| HOXC13 | ILF2 | 0.704787 | 4 | 0 | 4 |
| HOXC13 | TAF5L | 0.701711 | 4 | 0 | 3 |
| HOXC13 | WDR53 | 0.699972 | 7 | 0 | 7 |
| HOXC13 | FAM91A1 | 0.69703 | 4 | 0 | 4 |
| HOXC13 | DHRS13 | 0.695055 | 3 | 0 | 3 |
| HOXC13 | HOXC9 | 0.694235 | 5 | 0 | 5 |
| HOXC13 | TSN | 0.69295 | 3 | 0 | 3 |
| HOXC13 | SIX4 | 0.690619 | 4 | 0 | 3 |
| HOXC13 | COL27A1 | 0.68597 | 5 | 0 | 5 |
| HOXC13 | GPR158 | 0.683746 | 5 | 0 | 5 |
| HOXC13 | LASP1 | 0.68358 | 3 | 0 | 3 |
| HOXC13 | TTC9C | 0.683471 | 4 | 0 | 4 |
| HOXC13 | HOXC10 | 0.683322 | 10 | 0 | 9 |
| HOXC13 | TMEM138 | 0.673094 | 6 | 0 | 5 |
| HOXC13 | TUBA1C | 0.668845 | 3 | 0 | 3 |
| HOXC13 | PPT1 | 0.668605 | 5 | 0 | 5 |
For details and further investigation, click here
