IST1

 

Full name: IST1 factor associated with ESCRT-III Alias Symbol: CHMP8
Type: protein-coding gene Cytoband: 16q22.2
Entrez ID: 9798 HGNC ID: HGNC:28977 Ensembl Gene: ENSG00000182149 OMIM ID: 616434
Drug and gene relationship at DGIdb
Screen Evidence:

 

Expression of IST1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 IST1 9798 200851_s_at 0.1039 0.7858
GSE20347 IST1 9798 200851_s_at 0.1803 0.0250
GSE23400 IST1 9798 200851_s_at 0.0811 0.1135
GSE26886 IST1 9798 200851_s_at -0.5097 0.0005
GSE29001 IST1 9798 200851_s_at -0.0435 0.7697
GSE38129 IST1 9798 200851_s_at 0.1902 0.0304
GSE45670 IST1 9798 200851_s_at 0.0224 0.8042
GSE53622 IST1 9798 95770 0.0174 0.7865
GSE53624 IST1 9798 100603 -0.0212 0.6825
GSE63941 IST1 9798 200851_s_at 0.1952 0.5789
GSE77861 IST1 9798 200851_s_at 0.2530 0.1609
GSE97050 IST1 9798 A_23_P206759 0.0316 0.9317
SRP007169 IST1 9798 RNAseq -0.8727 0.0080
SRP008496 IST1 9798 RNAseq -0.7826 0.0018
SRP064894 IST1 9798 RNAseq -0.3094 0.0041
SRP133303 IST1 9798 RNAseq 0.0879 0.4785
SRP159526 IST1 9798 RNAseq -0.0438 0.8237
SRP193095 IST1 9798 RNAseq -0.1934 0.0409
SRP219564 IST1 9798 RNAseq -0.3186 0.2039

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by IST1 expression:

 

GSE53622GSE53624

 

Note: Click image to view full size file.  


Copy number change of IST1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 IST1 9798 4 0 26
GSE20123 IST1 9798 4 0 26
GSE43470 IST1 9798 2 8 33
GSE46452 IST1 9798 38 2 19
GSE47630 IST1 9798 11 8 21
GSE54993 IST1 9798 2 4 64
GSE54994 IST1 9798 8 10 35
GSE60625 IST1 9798 4 0 7
GSE74703 IST1 9798 2 5 29
GSE74704 IST1 9798 2 0 18
TCGA IST1 9798 27 13 56

Total number of gains: 104; Total number of losses: 50; Total Number of normals: 334.  


 

Somatic mutations of IST1:

 

Generating mutation plots.

 

Highly correlated genes for IST1:

 

Showing top 20/206 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
IST1SNX120.794351303
IST1COX7A2L0.766371303
IST1PPIE0.7584303
IST1RAB210.750489303
IST1LRBA0.737528303
IST1SUPT4H10.734411404
IST1ZNF5950.732001303
IST1NAA200.720175303
IST1GCLC0.719371303
IST1WARS20.716398303
IST1BSDC10.713125303
IST1MRPL370.709668303
IST1SPAG90.707114303
IST1SLC7A60.698988303
IST1ATP6V1B20.691018403
IST1TNIP10.689935303
IST1RAB1A0.688579403
IST1EML40.686465403
IST1TTLL40.686108303
IST1PCDH120.686091303

For details and further investigation, click here