KRT12

 

Full name: keratin 12 Alias Symbol: K12
Type: protein-coding gene Cytoband: 17q21.2
Entrez ID: 3859 HGNC ID: HGNC:6414 Ensembl Gene: ENSG00000187242 OMIM ID: 601687
Drug and gene relationship at DGIdb

 

Expression of KRT12:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 KRT12 3859 207811_at -0.0874 0.6752
GSE20347 KRT12 3859 207811_at 0.0435 0.4552
GSE23400 KRT12 3859 207811_at -0.0046 0.8857
GSE26886 KRT12 3859 207811_at 0.2053 0.0385
GSE29001 KRT12 3859 207811_at -0.1906 0.1640
GSE38129 KRT12 3859 207811_at 0.0003 0.9974
GSE45670 KRT12 3859 207811_at 0.1931 0.0198
GSE63941 KRT12 3859 207811_at 0.1114 0.4737
GSE77861 KRT12 3859 207811_at -0.0633 0.4083
TCGA KRT12 3859 RNAseq -2.6180 0.0325

Upregulated datasets: 0; Downregulated datasets: 1.  


 

Survival by KRT12 expression:

 

TCGA

 

Note: Click image to view full size file.  


Copy number change of KRT12:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 KRT12 3859 7 1 22
GSE20123 KRT12 3859 7 1 22
GSE43470 KRT12 3859 1 2 40
GSE46452 KRT12 3859 34 0 25
GSE47630 KRT12 3859 8 1 31
GSE54993 KRT12 3859 3 4 63
GSE54994 KRT12 3859 8 5 40
GSE60625 KRT12 3859 4 0 7
GSE74703 KRT12 3859 1 1 34
GSE74704 KRT12 3859 5 1 14
TCGA KRT12 3859 22 8 66

Total number of gains: 100; Total number of losses: 24; Total Number of normals: 364.  


 

Somatic mutations of KRT12:

 

Generating mutation plots.

 

Highly correlated genes for KRT12:

 

Showing top 20/281 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
KRT12FOLH10.718846606
KRT12RIT20.667669403
KRT12RORC0.661687303
KRT12RAPGEF30.659313303
KRT12GAL3ST10.643125303
KRT12CCDC70.639582403
KRT12EPHA60.638855303
KRT12CDY10.637429303
KRT12KRT380.635239404
KRT12OR2B20.631794604
KRT12GPR120.628739404
KRT12EPN10.62424303
KRT12MAPK40.622619403
KRT12FGF210.62107303
KRT12CBL0.620798404
KRT12TERT0.619025403
KRT12SMCP0.615223503
KRT12GDNF0.614297303
KRT12NYX0.613415504
KRT12NTNG10.610206403

For details and further investigation, click here