KRT38

 

Full name: keratin 38 Alias Symbol: 
Type: protein-coding gene Cytoband: 17q21.2
Entrez ID: 8687 HGNC ID: HGNC:6456 Ensembl Gene: ENSG00000171360 OMIM ID: 604542
Drug and gene relationship at DGIdb

 

Expression of KRT38:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 KRT38 8687 207716_at -0.0013 0.9968
GSE20347 KRT38 8687 207716_at -0.0175 0.8419
GSE23400 KRT38 8687 207716_at -0.0675 0.1409
GSE26886 KRT38 8687 207716_at 0.0309 0.7534
GSE29001 KRT38 8687 207716_at -0.0834 0.7072
GSE38129 KRT38 8687 207716_at -0.0678 0.4518
GSE45670 KRT38 8687 207716_at 0.0774 0.4995
GSE53622 KRT38 8687 56589 0.0796 0.4000
GSE53624 KRT38 8687 56589 0.0308 0.8175
GSE63941 KRT38 8687 207716_at 0.2345 0.7891
GSE77861 KRT38 8687 207716_at 0.0623 0.7169
SRP133303 KRT38 8687 RNAseq -4.2066 0.0000
TCGA KRT38 8687 RNAseq 1.7771 0.1145

Upregulated datasets: 0; Downregulated datasets: 1.  


 

Survival by KRT38 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of KRT38:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 KRT38 8687 6 2 22
GSE20123 KRT38 8687 6 2 22
GSE43470 KRT38 8687 1 2 40
GSE46452 KRT38 8687 34 0 25
GSE47630 KRT38 8687 8 1 31
GSE54993 KRT38 8687 3 4 63
GSE54994 KRT38 8687 8 5 40
GSE60625 KRT38 8687 4 0 7
GSE74703 KRT38 8687 1 1 34
GSE74704 KRT38 8687 4 1 15
TCGA KRT38 8687 23 7 66

Total number of gains: 98; Total number of losses: 25; Total Number of normals: 365.  


 

Somatic mutations of KRT38:

 

Generating mutation plots.

 

Highly correlated genes for KRT38:

 

Showing top 20/634 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
KRT38LINC008370.808024303
KRT38GJB40.764447404
KRT38TAS2R10.742674303
KRT38OPRM10.732879303
KRT38NUDT70.730009303
KRT38AMBN0.729211505
KRT38NMNAT20.727817303
KRT38FOXN3-AS20.724672404
KRT38G6PC20.72443404
KRT38CER10.723002404
KRT38TUB0.72184404
KRT38SLC6A50.720296303
KRT38EPOR0.71893404
KRT38KIR2DS30.718399404
KRT38MC4R0.711855303
KRT38ADAM210.710123303
KRT38MAS10.704535404
KRT38BTNL20.704263403
KRT38GCNT40.703738303
KRT38CBL0.696586404

For details and further investigation, click here