EPHA6

 

Full name: EPH receptor A6 Alias Symbol: FLJ35246
Type: protein-coding gene Cytoband: 3q11.2
Entrez ID: 285220 HGNC ID: HGNC:19296 Ensembl Gene: ENSG00000080224 OMIM ID: 600066
Drug and gene relationship at DGIdb

 

EPHA6 involved pathways:

KEGG pathway Description View
hsa04360Axon guidance

 

Expression of EPHA6:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 EPHA6 285220 233184_at -0.1147 0.6762
GSE26886 EPHA6 285220 233184_at 0.0650 0.4550
GSE45670 EPHA6 285220 233184_at -0.0261 0.8167
GSE53622 EPHA6 285220 4735 -1.1753 0.0000
GSE53624 EPHA6 285220 109677 0.4979 0.0012
GSE63941 EPHA6 285220 233184_at 0.1808 0.4037
GSE77861 EPHA6 285220 233184_at 0.0242 0.8094
GSE97050 EPHA6 285220 A_33_P3408782 -0.2513 0.3609
SRP007169 EPHA6 285220 RNAseq 2.1553 0.0811
SRP133303 EPHA6 285220 RNAseq -0.5693 0.4101
SRP193095 EPHA6 285220 RNAseq -0.8123 0.0950
SRP219564 EPHA6 285220 RNAseq -0.0600 0.9522
TCGA EPHA6 285220 RNAseq -0.5669 0.3661

Upregulated datasets: 0; Downregulated datasets: 1.  


 

Survival by EPHA6 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of EPHA6:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 EPHA6 285220 20 1 9
GSE20123 EPHA6 285220 19 1 10
GSE43470 EPHA6 285220 18 1 24
GSE46452 EPHA6 285220 12 7 40
GSE47630 EPHA6 285220 16 6 18
GSE54993 EPHA6 285220 3 5 62
GSE54994 EPHA6 285220 27 5 21
GSE60625 EPHA6 285220 0 6 5
GSE74703 EPHA6 285220 14 1 21
GSE74704 EPHA6 285220 14 1 5
TCGA EPHA6 285220 53 15 28

Total number of gains: 196; Total number of losses: 49; Total Number of normals: 243.  


 

Somatic mutations of EPHA6:

 

Generating mutation plots.

 

Highly correlated genes for EPHA6:

 

Showing top 20/168 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
EPHA6SMOC20.711862303
EPHA6ITGA70.704942303
EPHA6DCLK20.699766303
EPHA6TCEAL20.698925303
EPHA6ARHGEF250.698599303
EPHA6ADCY50.690597404
EPHA6RGS20.688816303
EPHA6PLP10.688699303
EPHA6PRUNE20.687514303
EPHA6CACNA1C0.686752303
EPHA6NLGN10.684402303
EPHA6PPP1R14A0.684145303
EPHA6NRXN30.678614303
EPHA6LIMS20.677675303
EPHA6FBXL70.67152303
EPHA6SGCA0.668289303
EPHA6CADM30.667882403
EPHA6NEXN0.665263303
EPHA6TNS10.664044303
EPHA6LONRF20.654991303

For details and further investigation, click here