| Full name: lipocalin 9 | Alias Symbol: | ||
| Type: protein-coding gene | Cytoband: 9q34.3 | ||
| Entrez ID: 392399 | HGNC ID: HGNC:17442 | Ensembl Gene: ENSG00000148386 | OMIM ID: 612903 |
Expression of LCN9:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE53622 | LCN9 | 392399 | 94278 | 0.2093 | 0.0007 | |
| GSE53624 | LCN9 | 392399 | 94278 | 0.1376 | 0.1012 | |
| GSE97050 | LCN9 | 392399 | A_33_P3423931 | -0.0205 | 0.9329 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by LCN9 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of LCN9:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LCN9 | 392399 | 4 | 7 | 19 | |
| GSE20123 | LCN9 | 392399 | 4 | 7 | 19 | |
| GSE43470 | LCN9 | 392399 | 3 | 7 | 33 | |
| GSE46452 | LCN9 | 392399 | 6 | 13 | 40 | |
| GSE47630 | LCN9 | 392399 | 6 | 15 | 19 | |
| GSE54993 | LCN9 | 392399 | 3 | 3 | 64 | |
| GSE54994 | LCN9 | 392399 | 12 | 8 | 33 | |
| GSE60625 | LCN9 | 392399 | 0 | 0 | 11 | |
| GSE74703 | LCN9 | 392399 | 3 | 5 | 28 | |
| GSE74704 | LCN9 | 392399 | 2 | 5 | 13 | |
| TCGA | LCN9 | 392399 | 28 | 25 | 43 |
Total number of gains: 71; Total number of losses: 95; Total Number of normals: 322.
Somatic mutations of LCN9:
Generating mutation plots.
Highly correlated genes for LCN9:
Showing top 20/91 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LCN9 | IL21 | 0.78161 | 3 | 0 | 3 |
| LCN9 | GPHA2 | 0.779682 | 3 | 0 | 3 |
| LCN9 | MAG | 0.777343 | 3 | 0 | 3 |
| LCN9 | FBRSL1 | 0.767494 | 3 | 0 | 3 |
| LCN9 | SHISA7 | 0.757825 | 3 | 0 | 3 |
| LCN9 | KCNH3 | 0.754255 | 3 | 0 | 3 |
| LCN9 | CLTCL1 | 0.746354 | 3 | 0 | 3 |
| LCN9 | CIB3 | 0.745969 | 3 | 0 | 3 |
| LCN9 | FOXE3 | 0.743465 | 3 | 0 | 3 |
| LCN9 | PGP | 0.74336 | 3 | 0 | 3 |
| LCN9 | PNLIPRP1 | 0.743096 | 3 | 0 | 3 |
| LCN9 | EVX1 | 0.742777 | 3 | 0 | 3 |
| LCN9 | CADPS | 0.742241 | 3 | 0 | 3 |
| LCN9 | SPACA3 | 0.742235 | 3 | 0 | 3 |
| LCN9 | DCDC1 | 0.738687 | 3 | 0 | 3 |
| LCN9 | STRC | 0.736906 | 3 | 0 | 3 |
| LCN9 | DNAI1 | 0.736842 | 3 | 0 | 3 |
| LCN9 | ZNF329 | 0.735927 | 3 | 0 | 3 |
| LCN9 | CDH22 | 0.73555 | 3 | 0 | 3 |
| LCN9 | NPPB | 0.735169 | 3 | 0 | 3 |
For details and further investigation, click here
