| Full name: long intergenic non-protein coding RNA 460 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 13q33.2 | ||
| Entrez ID: 728192 | HGNC ID: HGNC:42809 | Ensembl Gene: ENSG00000233532 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of LINC00460:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC00460 | 728192 | 1558930_at | 0.6060 | 0.3779 | |
| GSE26886 | LINC00460 | 728192 | 1558930_at | 0.7736 | 0.0390 | |
| GSE45670 | LINC00460 | 728192 | 1558930_at | 0.6140 | 0.0397 | |
| GSE53622 | LINC00460 | 728192 | 96095 | 1.4268 | 0.0000 | |
| GSE53624 | LINC00460 | 728192 | 66292 | 2.2114 | 0.0000 | |
| GSE63941 | LINC00460 | 728192 | 1558930_at | 0.3772 | 0.2160 | |
| GSE77861 | LINC00460 | 728192 | 1558930_at | 0.1216 | 0.7037 |
Upregulated datasets: 2; Downregulated datasets: 0.
Survival by LINC00460 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of LINC00460:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC00460 | 728192 | 6 | 10 | 14 | |
| GSE20123 | LINC00460 | 728192 | 6 | 9 | 15 | |
| GSE43470 | LINC00460 | 728192 | 4 | 11 | 28 | |
| GSE46452 | LINC00460 | 728192 | 1 | 31 | 27 | |
| GSE47630 | LINC00460 | 728192 | 3 | 26 | 11 | |
| GSE54993 | LINC00460 | 728192 | 11 | 4 | 55 | |
| GSE54994 | LINC00460 | 728192 | 7 | 8 | 38 | |
| GSE60625 | LINC00460 | 728192 | 0 | 3 | 8 | |
| GSE74703 | LINC00460 | 728192 | 3 | 9 | 24 | |
| GSE74704 | LINC00460 | 728192 | 4 | 9 | 7 | |
| TCGA | LINC00460 | 728192 | 15 | 34 | 47 |
Total number of gains: 60; Total number of losses: 154; Total Number of normals: 274.
Somatic mutations of LINC00460:
Generating mutation plots.
Highly correlated genes for LINC00460:
Showing top 20/235 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC00460 | C2CD4A | 0.750866 | 3 | 0 | 3 |
| LINC00460 | TNNT1 | 0.713118 | 4 | 0 | 4 |
| LINC00460 | NUTF2 | 0.707515 | 3 | 0 | 3 |
| LINC00460 | RUNX1-IT1 | 0.692692 | 4 | 0 | 3 |
| LINC00460 | HYAL4 | 0.690687 | 3 | 0 | 3 |
| LINC00460 | TPCN2 | 0.690094 | 4 | 0 | 3 |
| LINC00460 | SLCO1B3 | 0.677017 | 3 | 0 | 3 |
| LINC00460 | MMP14 | 0.673734 | 5 | 0 | 5 |
| LINC00460 | PDPN | 0.66788 | 4 | 0 | 4 |
| LINC00460 | RPL3L | 0.667076 | 4 | 0 | 4 |
| LINC00460 | MARK3 | 0.666964 | 3 | 0 | 3 |
| LINC00460 | C11orf24 | 0.655882 | 4 | 0 | 3 |
| LINC00460 | TUBA4B | 0.651732 | 3 | 0 | 3 |
| LINC00460 | STON2 | 0.650659 | 4 | 0 | 4 |
| LINC00460 | TUBAL3 | 0.650248 | 3 | 0 | 3 |
| LINC00460 | GNG13 | 0.650136 | 3 | 0 | 3 |
| LINC00460 | KANK4 | 0.648762 | 5 | 0 | 4 |
| LINC00460 | PLEK2 | 0.642567 | 6 | 0 | 4 |
| LINC00460 | TMSB10 | 0.639113 | 4 | 0 | 3 |
| LINC00460 | CHST2 | 0.638311 | 3 | 0 | 3 |
For details and further investigation, click here
