| Full name: RUNX1 intronic transcript 1 | Alias Symbol: FLJ20856 | ||
| Type: non-coding RNA | Cytoband: 21q22.12 | ||
| Entrez ID: 80215 | HGNC ID: HGNC:16623 | Ensembl Gene: | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of RUNX1-IT1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | RUNX1-IT1 | 80215 | 220918_at | 0.9639 | 0.1017 | |
| GSE20347 | RUNX1-IT1 | 80215 | 220918_at | 0.5725 | 0.0031 | |
| GSE23400 | RUNX1-IT1 | 80215 | 220918_at | 0.3586 | 0.0000 | |
| GSE26886 | RUNX1-IT1 | 80215 | 220918_at | 0.8742 | 0.0003 | |
| GSE29001 | RUNX1-IT1 | 80215 | 220918_at | 0.8605 | 0.0011 | |
| GSE38129 | RUNX1-IT1 | 80215 | 220918_at | 0.5190 | 0.0088 | |
| GSE45670 | RUNX1-IT1 | 80215 | 220918_at | 0.8589 | 0.0190 | |
| GSE63941 | RUNX1-IT1 | 80215 | 220918_at | 0.7947 | 0.3303 | |
| GSE77861 | RUNX1-IT1 | 80215 | 220918_at | 0.2743 | 0.2559 | |
| SRP133303 | RUNX1-IT1 | 80215 | RNAseq | 0.8670 | 0.0001 | |
| SRP193095 | RUNX1-IT1 | 80215 | RNAseq | 1.2070 | 0.0000 |
Upregulated datasets: 1; Downregulated datasets: 0.
Copy number change of RUNX1-IT1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | RUNX1-IT1 | 80215 | 2 | 8 | 20 | |
| GSE20123 | RUNX1-IT1 | 80215 | 2 | 8 | 20 | |
| GSE43470 | RUNX1-IT1 | 80215 | 1 | 11 | 31 | |
| GSE46452 | RUNX1-IT1 | 80215 | 1 | 21 | 37 | |
| GSE47630 | RUNX1-IT1 | 80215 | 6 | 17 | 17 | |
| GSE54993 | RUNX1-IT1 | 80215 | 9 | 1 | 60 | |
| GSE54994 | RUNX1-IT1 | 80215 | 1 | 9 | 43 | |
| GSE60625 | RUNX1-IT1 | 80215 | 0 | 0 | 11 | |
| GSE74703 | RUNX1-IT1 | 80215 | 1 | 8 | 27 | |
| GSE74704 | RUNX1-IT1 | 80215 | 1 | 5 | 14 |
Total number of gains: 24; Total number of losses: 88; Total Number of normals: 280.
Somatic mutations of RUNX1-IT1:
Generating mutation plots.
Highly correlated genes for RUNX1-IT1:
Showing top 20/691 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| RUNX1-IT1 | CERCAM | 0.819651 | 3 | 0 | 3 |
| RUNX1-IT1 | TTYH3 | 0.781822 | 4 | 0 | 4 |
| RUNX1-IT1 | CCM2 | 0.766371 | 4 | 0 | 4 |
| RUNX1-IT1 | RIN1 | 0.762756 | 3 | 0 | 3 |
| RUNX1-IT1 | UCN2 | 0.759416 | 3 | 0 | 3 |
| RUNX1-IT1 | SLC2A3 | 0.744725 | 4 | 0 | 4 |
| RUNX1-IT1 | CYP27C1 | 0.737777 | 4 | 0 | 4 |
| RUNX1-IT1 | INO80B | 0.733124 | 3 | 0 | 3 |
| RUNX1-IT1 | COL5A3 | 0.724476 | 6 | 0 | 6 |
| RUNX1-IT1 | IGSF8 | 0.721771 | 4 | 0 | 4 |
| RUNX1-IT1 | SALL4 | 0.721216 | 4 | 0 | 4 |
| RUNX1-IT1 | BGN | 0.71919 | 7 | 0 | 7 |
| RUNX1-IT1 | TSPAN10 | 0.719 | 3 | 0 | 3 |
| RUNX1-IT1 | SPOCD1 | 0.71782 | 3 | 0 | 3 |
| RUNX1-IT1 | SH3PXD2B | 0.714967 | 4 | 0 | 4 |
| RUNX1-IT1 | WDR54 | 0.711218 | 4 | 0 | 4 |
| RUNX1-IT1 | GRIN2D | 0.709438 | 3 | 0 | 3 |
| RUNX1-IT1 | GPX8 | 0.70817 | 4 | 0 | 4 |
| RUNX1-IT1 | ADAMTS12 | 0.708009 | 4 | 0 | 4 |
| RUNX1-IT1 | SH2D5 | 0.702899 | 4 | 0 | 4 |
For details and further investigation, click here
