| Full name: long intergenic non-protein coding RNA 659 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 20q13.33 | ||
| Entrez ID: 100652730 | HGNC ID: HGNC:44316 | Ensembl Gene: ENSG00000228705 | OMIM ID: |
Expression of LINC00659:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC00659 | 100652730 | 1562478_at | -0.0050 | 0.9881 | |
| GSE26886 | LINC00659 | 100652730 | 1562478_at | -0.1154 | 0.3447 | |
| GSE45670 | LINC00659 | 100652730 | 1562478_at | 0.0220 | 0.8762 | |
| GSE53622 | LINC00659 | 100652730 | 52107 | 0.7456 | 0.0000 | |
| GSE53624 | LINC00659 | 100652730 | 52107 | 0.7319 | 0.0000 | |
| GSE63941 | LINC00659 | 100652730 | 1562478_at | 0.2189 | 0.1593 | |
| GSE77861 | LINC00659 | 100652730 | 1562478_at | -0.0715 | 0.5287 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by LINC00659 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of LINC00659:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC00659 | 100652730 | 14 | 2 | 14 | |
| GSE20123 | LINC00659 | 100652730 | 14 | 2 | 14 | |
| GSE43470 | LINC00659 | 100652730 | 11 | 1 | 31 | |
| GSE46452 | LINC00659 | 100652730 | 35 | 0 | 24 | |
| GSE47630 | LINC00659 | 100652730 | 25 | 1 | 14 | |
| GSE54993 | LINC00659 | 100652730 | 0 | 17 | 53 | |
| GSE54994 | LINC00659 | 100652730 | 29 | 0 | 24 | |
| GSE60625 | LINC00659 | 100652730 | 0 | 0 | 11 | |
| GSE74703 | LINC00659 | 100652730 | 10 | 0 | 26 | |
| GSE74704 | LINC00659 | 100652730 | 11 | 0 | 9 | |
| TCGA | LINC00659 | 100652730 | 43 | 4 | 49 |
Total number of gains: 192; Total number of losses: 27; Total Number of normals: 269.
Somatic mutations of LINC00659:
Generating mutation plots.
Highly correlated genes for LINC00659:
Showing top 20/71 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC00659 | SLC6A3 | 0.687186 | 3 | 0 | 3 |
| LINC00659 | TMEM235 | 0.666771 | 3 | 0 | 3 |
| LINC00659 | KCNK9 | 0.666232 | 3 | 0 | 3 |
| LINC00659 | FAM71F1 | 0.643406 | 3 | 0 | 3 |
| LINC00659 | TRIM10 | 0.64016 | 4 | 0 | 4 |
| LINC00659 | PDGFB | 0.634371 | 3 | 0 | 3 |
| LINC00659 | GRM3 | 0.63347 | 3 | 0 | 3 |
| LINC00659 | SCGN | 0.628717 | 4 | 0 | 3 |
| LINC00659 | OFCC1 | 0.623165 | 3 | 0 | 3 |
| LINC00659 | LINC00311 | 0.611766 | 4 | 0 | 3 |
| LINC00659 | NPPB | 0.606628 | 4 | 0 | 4 |
| LINC00659 | NSMF | 0.606347 | 4 | 0 | 4 |
| LINC00659 | ST8SIA3 | 0.604884 | 3 | 0 | 3 |
| LINC00659 | CRMP1 | 0.603929 | 3 | 0 | 3 |
| LINC00659 | C11orf72 | 0.601277 | 3 | 0 | 3 |
| LINC00659 | SMAD2 | 0.600958 | 3 | 0 | 3 |
| LINC00659 | HPX | 0.592829 | 3 | 0 | 3 |
| LINC00659 | CIB3 | 0.589405 | 4 | 0 | 3 |
| LINC00659 | ZNF517 | 0.581859 | 3 | 0 | 3 |
| LINC00659 | EXOG | 0.574834 | 3 | 0 | 3 |
For details and further investigation, click here
