| Full name: leucine rich single-pass membrane protein 2 | Alias Symbol: FLJ38608 | ||
| Type: protein-coding gene | Cytoband: 3p21.31 | ||
| Entrez ID: 132228 | HGNC ID: HGNC:26781 | Ensembl Gene: ENSG00000179564 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of LSMEM2:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LSMEM2 | 132228 | 237024_at | -0.2967 | 0.2710 | |
| GSE26886 | LSMEM2 | 132228 | 237024_at | -0.1518 | 0.2744 | |
| GSE45670 | LSMEM2 | 132228 | 237024_at | -0.0450 | 0.6964 | |
| GSE53622 | LSMEM2 | 132228 | 71065 | -0.5889 | 0.0000 | |
| GSE53624 | LSMEM2 | 132228 | 71065 | -0.3047 | 0.0000 | |
| GSE63941 | LSMEM2 | 132228 | 237024_at | 0.2945 | 0.0808 | |
| GSE77861 | LSMEM2 | 132228 | 237024_at | -0.2797 | 0.0572 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by LSMEM2 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of LSMEM2:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LSMEM2 | 132228 | 0 | 18 | 12 | |
| GSE20123 | LSMEM2 | 132228 | 0 | 19 | 11 | |
| GSE43470 | LSMEM2 | 132228 | 0 | 19 | 24 | |
| GSE46452 | LSMEM2 | 132228 | 2 | 16 | 41 | |
| GSE47630 | LSMEM2 | 132228 | 1 | 24 | 15 | |
| GSE54993 | LSMEM2 | 132228 | 6 | 2 | 62 | |
| GSE54994 | LSMEM2 | 132228 | 1 | 33 | 19 | |
| GSE60625 | LSMEM2 | 132228 | 5 | 0 | 6 | |
| GSE74703 | LSMEM2 | 132228 | 0 | 15 | 21 | |
| GSE74704 | LSMEM2 | 132228 | 0 | 12 | 8 | |
| TCGA | LSMEM2 | 132228 | 0 | 78 | 18 |
Total number of gains: 15; Total number of losses: 236; Total Number of normals: 237.
Somatic mutations of LSMEM2:
Generating mutation plots.
Highly correlated genes for LSMEM2:
Showing top 20/117 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LSMEM2 | RGL4 | 0.743795 | 3 | 0 | 3 |
| LSMEM2 | CYP3A43 | 0.694094 | 3 | 0 | 3 |
| LSMEM2 | TSSK2 | 0.684124 | 3 | 0 | 3 |
| LSMEM2 | SCN2B | 0.672621 | 3 | 0 | 3 |
| LSMEM2 | CXCR5 | 0.664959 | 3 | 0 | 3 |
| LSMEM2 | TMEM114 | 0.664771 | 3 | 0 | 3 |
| LSMEM2 | OPTC | 0.662148 | 3 | 0 | 3 |
| LSMEM2 | SPATA31E1 | 0.66111 | 3 | 0 | 3 |
| LSMEM2 | CCL24 | 0.659017 | 3 | 0 | 3 |
| LSMEM2 | SPNS3 | 0.649689 | 4 | 0 | 4 |
| LSMEM2 | NODAL | 0.644446 | 3 | 0 | 3 |
| LSMEM2 | ADAM11 | 0.643617 | 3 | 0 | 3 |
| LSMEM2 | LINC00922 | 0.643472 | 4 | 0 | 4 |
| LSMEM2 | HCAR3 | 0.635905 | 3 | 0 | 3 |
| LSMEM2 | S100G | 0.635251 | 3 | 0 | 3 |
| LSMEM2 | UBE2D2 | 0.633047 | 4 | 0 | 4 |
| LSMEM2 | ADCY4 | 0.627423 | 3 | 0 | 3 |
| LSMEM2 | TSPAN32 | 0.626351 | 3 | 0 | 3 |
| LSMEM2 | CLINT1 | 0.624066 | 3 | 0 | 3 |
| LSMEM2 | IGSF21 | 0.619127 | 3 | 0 | 3 |
For details and further investigation, click here
