MGP

 

Full name: matrix Gla protein Alias Symbol: 
Type: protein-coding gene Cytoband: 12p12.3
Entrez ID: 4256 HGNC ID: HGNC:7060 Ensembl Gene: ENSG00000111341 OMIM ID: 154870
Drug and gene relationship at DGIdb

 

Expression of MGP:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 MGP 4256 202291_s_at -1.2908 0.3313
GSE20347 MGP 4256 202291_s_at -0.0198 0.9805
GSE23400 MGP 4256 202291_s_at -0.4226 0.1296
GSE26886 MGP 4256 202291_s_at 2.0540 0.0025
GSE29001 MGP 4256 202291_s_at 0.1014 0.8800
GSE38129 MGP 4256 202291_s_at -0.4268 0.6053
GSE45670 MGP 4256 202291_s_at -3.4096 0.0000
GSE53622 MGP 4256 55918 -1.1779 0.0000
GSE53624 MGP 4256 55918 -0.9369 0.0000
GSE63941 MGP 4256 202291_s_at -5.2020 0.0002
GSE77861 MGP 4256 202291_s_at 1.5086 0.0347
GSE97050 MGP 4256 A_23_P204286 -1.0653 0.1819
SRP007169 MGP 4256 RNAseq 2.9463 0.0000
SRP008496 MGP 4256 RNAseq 3.4075 0.0000
SRP064894 MGP 4256 RNAseq 0.7939 0.1550
SRP133303 MGP 4256 RNAseq -0.9448 0.0790
SRP159526 MGP 4256 RNAseq 0.8051 0.0989
SRP193095 MGP 4256 RNAseq 0.9228 0.0186
SRP219564 MGP 4256 RNAseq -0.2274 0.8439
TCGA MGP 4256 RNAseq -0.4648 0.0021

Upregulated datasets: 4; Downregulated datasets: 3.  


 

Survival by MGP expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of MGP:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 MGP 4256 6 2 22
GSE20123 MGP 4256 6 2 22
GSE43470 MGP 4256 9 4 30
GSE46452 MGP 4256 10 1 48
GSE47630 MGP 4256 14 1 25
GSE54993 MGP 4256 1 9 60
GSE54994 MGP 4256 10 2 41
GSE60625 MGP 4256 0 1 10
GSE74703 MGP 4256 9 3 24
GSE74704 MGP 4256 4 1 15
TCGA MGP 4256 41 5 50

Total number of gains: 110; Total number of losses: 31; Total Number of normals: 347.  


 

Somatic mutations of MGP:

 

Generating mutation plots.

 

Highly correlated genes for MGP:

 

Showing top 20/1064 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
MGPA2M0.81888813013
MGPACTA20.80647713013
MGPMIR100HG0.785137606
MGPMRVI10.776615808
MGPJAM30.76887813013
MGPPLN0.76885213012
MGPRSPO30.762456909
MGPTAGLN0.76218112012
MGPMYLK0.76123613013
MGPSMOC20.760037707
MGPMAGI2-AS30.757266605
MGPACTG20.75449513013
MGPJAM20.75344511011
MGPPDLIM30.75111213012
MGPFERMT20.75108813013
MGPTUBA1A0.751068909
MGPTTC7B0.748216303
MGPCELF20.74792110010
MGPPDE1A0.74603711010
MGPANXA60.74602312012

For details and further investigation, click here