MYO5B

 

Full name: myosin VB Alias Symbol: KIAA1119
Type: protein-coding gene Cytoband: 18q
Entrez ID: 4645 HGNC ID: HGNC:7603 Ensembl Gene: ENSG00000167306 OMIM ID: 606540
Drug and gene relationship at DGIdb

 

Expression of MYO5B:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 MYO5B 4645 225301_s_at -1.3710 0.1863
GSE26886 MYO5B 4645 225301_s_at -1.4513 0.0000
GSE45670 MYO5B 4645 225301_s_at -0.5251 0.0605
GSE53622 MYO5B 4645 4384 -1.4515 0.0000
GSE53624 MYO5B 4645 4384 -2.0239 0.0000
GSE63941 MYO5B 4645 225301_s_at 3.2833 0.0012
GSE77861 MYO5B 4645 225301_s_at -1.2982 0.0206
GSE97050 MYO5B 4645 A_33_P3317979 -0.0817 0.7533
SRP007169 MYO5B 4645 RNAseq -2.0607 0.0000
SRP008496 MYO5B 4645 RNAseq -1.6935 0.0000
SRP064894 MYO5B 4645 RNAseq -2.6342 0.0000
SRP133303 MYO5B 4645 RNAseq -1.3731 0.0000
SRP159526 MYO5B 4645 RNAseq -2.2102 0.0000
SRP193095 MYO5B 4645 RNAseq -1.7781 0.0000
SRP219564 MYO5B 4645 RNAseq -2.2261 0.0104
TCGA MYO5B 4645 RNAseq -0.2844 0.0265

Upregulated datasets: 1; Downregulated datasets: 11.  


 

Survival by MYO5B expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of MYO5B:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 MYO5B 4645 1 9 20
GSE20123 MYO5B 4645 1 9 20
GSE43470 MYO5B 4645 0 4 39
GSE46452 MYO5B 4645 1 26 32
GSE47630 MYO5B 4645 5 20 15
GSE54993 MYO5B 4645 9 0 61
GSE54994 MYO5B 4645 1 17 35
GSE60625 MYO5B 4645 0 4 7
GSE74703 MYO5B 4645 0 4 32
GSE74704 MYO5B 4645 1 6 13
TCGA MYO5B 4645 10 43 43

Total number of gains: 29; Total number of losses: 142; Total Number of normals: 317.  


 

Somatic mutations of MYO5B:

 

Generating mutation plots.

 

Highly correlated genes for MYO5B:

 

Showing top 20/964 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
MYO5BGDPD30.83398707
MYO5BEPS8L20.831711707
MYO5BPRSS20.830078505
MYO5BCES20.825057505
MYO5BSCNN1B0.823432707
MYO5BPRSS270.816372808
MYO5BVPS4B0.814143606
MYO5BRANBP90.806215606
MYO5BCHP10.802272606
MYO5BCLIC30.802055504
MYO5BSULT2B10.801775606
MYO5BMALL0.80082707
MYO5BVSIG10L0.796803707
MYO5BUSP6NL0.795902606
MYO5BTIAM10.794739707
MYO5BPADI10.794247505
MYO5BSNORA680.793301404
MYO5BSPINK70.79201707
MYO5BEPS8L10.790211808
MYO5BEVPL0.789991808

For details and further investigation, click here