| Full name: NBPF member 20 | Alias Symbol: | ||
| Type: protein-coding gene | Cytoband: 1q21.1 | ||
| Entrez ID: 100288142 | HGNC ID: HGNC:32000 | Ensembl Gene: ENSG00000162825 | OMIM ID: 614007 |
| Drug and gene relationship at DGIdb | |||
Expression of NBPF20:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | NBPF20 | 100288142 | 227926_s_at | 0.4275 | 0.5914 | |
| GSE26886 | NBPF20 | 100288142 | 227926_s_at | 1.5850 | 0.0000 | |
| GSE45670 | NBPF20 | 100288142 | 227926_s_at | -0.0904 | 0.7563 | |
| GSE53622 | NBPF20 | 100288142 | 18046 | -0.2845 | 0.0000 | |
| GSE53624 | NBPF20 | 100288142 | 18046 | -0.4326 | 0.0000 | |
| GSE63941 | NBPF20 | 100288142 | 227926_s_at | -1.7291 | 0.0017 | |
| GSE77861 | NBPF20 | 100288142 | 227926_s_at | 0.3830 | 0.1719 | |
| SRP007169 | NBPF20 | 100288142 | RNAseq | 2.0126 | 0.0052 | |
| SRP064894 | NBPF20 | 100288142 | RNAseq | 0.1441 | 0.5041 | |
| SRP133303 | NBPF20 | 100288142 | RNAseq | 0.2112 | 0.3303 | |
| SRP159526 | NBPF20 | 100288142 | RNAseq | 0.4181 | 0.1664 | |
| SRP193095 | NBPF20 | 100288142 | RNAseq | 0.5043 | 0.0027 | |
| SRP219564 | NBPF20 | 100288142 | RNAseq | 0.3235 | 0.3997 |
Upregulated datasets: 2; Downregulated datasets: 1.
Survival by NBPF20 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of NBPF20:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | NBPF20 | 100288142 | 13 | 1 | 16 | |
| GSE20123 | NBPF20 | 100288142 | 13 | 1 | 16 | |
| GSE43470 | NBPF20 | 100288142 | 5 | 2 | 36 | |
| GSE46452 | NBPF20 | 100288142 | 2 | 1 | 56 | |
| GSE47630 | NBPF20 | 100288142 | 12 | 2 | 26 | |
| GSE54993 | NBPF20 | 100288142 | 0 | 2 | 68 | |
| GSE54994 | NBPF20 | 100288142 | 15 | 0 | 38 | |
| GSE60625 | NBPF20 | 100288142 | 0 | 0 | 11 | |
| GSE74703 | NBPF20 | 100288142 | 5 | 2 | 29 | |
| GSE74704 | NBPF20 | 100288142 | 6 | 1 | 13 | |
| TCGA | NBPF20 | 100288142 | 33 | 15 | 48 |
Total number of gains: 104; Total number of losses: 27; Total Number of normals: 357.
Somatic mutations of NBPF20:
Generating mutation plots.
Highly correlated genes for NBPF20:
Showing top 20/244 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| NBPF20 | GREM1 | 0.804159 | 3 | 0 | 3 |
| NBPF20 | PRRX1 | 0.777566 | 3 | 0 | 3 |
| NBPF20 | MLXIP | 0.751873 | 3 | 0 | 3 |
| NBPF20 | WFS1 | 0.745792 | 3 | 0 | 3 |
| NBPF20 | COL8A1 | 0.741977 | 4 | 0 | 4 |
| NBPF20 | DEGS1 | 0.741221 | 3 | 0 | 3 |
| NBPF20 | RFTN1 | 0.73685 | 4 | 0 | 4 |
| NBPF20 | OSR1 | 0.734467 | 3 | 0 | 3 |
| NBPF20 | MMP2 | 0.729306 | 3 | 0 | 3 |
| NBPF20 | COL6A3 | 0.72719 | 3 | 0 | 3 |
| NBPF20 | MRGPRF | 0.717667 | 3 | 0 | 3 |
| NBPF20 | CEP290 | 0.717629 | 3 | 0 | 3 |
| NBPF20 | NNT-AS1 | 0.708856 | 3 | 0 | 3 |
| NBPF20 | RARRES2 | 0.70746 | 4 | 0 | 4 |
| NBPF20 | GLG1 | 0.706367 | 3 | 0 | 3 |
| NBPF20 | SEMA3C | 0.702208 | 3 | 0 | 3 |
| NBPF20 | PCDH9 | 0.698403 | 3 | 0 | 3 |
| NBPF20 | RAI14 | 0.697168 | 4 | 0 | 4 |
| NBPF20 | LRRN4CL | 0.696793 | 3 | 0 | 3 |
| NBPF20 | ADAMTS1 | 0.696257 | 3 | 0 | 3 |
For details and further investigation, click here
