GREM1

 

Full name: gremlin 1, DAN family BMP antagonist Alias Symbol: DRM|gremlin|DAND2|HMPS
Type: protein-coding gene Cytoband: 15q13.3
Entrez ID: 26585 HGNC ID: HGNC:2001 Ensembl Gene: ENSG00000166923 OMIM ID: 603054
Drug and gene relationship at DGIdb

 

Expression of GREM1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 GREM1 26585 218469_at 0.3375 0.7108
GSE20347 GREM1 26585 218469_at 1.6974 0.0052
GSE23400 GREM1 26585 218469_at 1.1868 0.0001
GSE26886 GREM1 26585 218469_at 3.4741 0.0001
GSE29001 GREM1 26585 218469_at 1.4488 0.0574
GSE38129 GREM1 26585 218469_at 1.2351 0.0257
GSE45670 GREM1 26585 218469_at -1.0867 0.2866
GSE53622 GREM1 26585 55847 0.4697 0.0086
GSE53624 GREM1 26585 55847 0.7425 0.0000
GSE63941 GREM1 26585 218468_s_at -9.5921 0.0000
GSE77861 GREM1 26585 218468_s_at 1.6101 0.0721
GSE97050 GREM1 26585 A_33_P3319870 0.9660 0.1801
SRP007169 GREM1 26585 RNAseq 5.4654 0.0000
SRP008496 GREM1 26585 RNAseq 6.6695 0.0000
SRP064894 GREM1 26585 RNAseq 1.5397 0.0003
SRP133303 GREM1 26585 RNAseq 1.7370 0.0001
SRP159526 GREM1 26585 RNAseq 0.2631 0.7445
SRP193095 GREM1 26585 RNAseq 3.0614 0.0000
SRP219564 GREM1 26585 RNAseq 2.4970 0.0023
TCGA GREM1 26585 RNAseq -0.0731 0.5717

Upregulated datasets: 10; Downregulated datasets: 1.  


 

Survival by GREM1 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of GREM1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 GREM1 26585 2 7 21
GSE20123 GREM1 26585 2 7 21
GSE43470 GREM1 26585 4 4 35
GSE46452 GREM1 26585 3 7 49
GSE47630 GREM1 26585 8 11 21
GSE54993 GREM1 26585 4 6 60
GSE54994 GREM1 26585 5 8 40
GSE60625 GREM1 26585 4 0 7
GSE74703 GREM1 26585 4 3 29
GSE74704 GREM1 26585 1 6 13
TCGA GREM1 26585 13 17 66

Total number of gains: 50; Total number of losses: 76; Total Number of normals: 362.  


 

Somatic mutations of GREM1:

 

Generating mutation plots.

 

Highly correlated genes for GREM1:

 

Showing top 20/603 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
GREM1C11orf960.836616303
GREM1FBN10.80527110010
GREM1NBPF200.804159303
GREM1COL6A30.7959413013
GREM1CTSK0.7778713013
GREM1VCAN0.77237313013
GREM1FN10.76620812012
GREM1COL8A10.7542731009
GREM1NID20.74699710010
GREM1FSTL10.73914612012
GREM1PPP1R14A0.734965303
GREM1RARRES20.73117113013
GREM1LUM0.73098813013
GREM1SPARC0.72514713012
GREM1MMP20.72233412010
GREM1CHN10.72106112011
GREM1FILIP1L0.72041312010
GREM1FNDC10.718686807
GREM1COL3A10.71556913012
GREM1COL1A20.71476113011

For details and further investigation, click here