RARRES2

 

Full name: retinoic acid receptor responder 2 Alias Symbol: TIG2|HP10433
Type: protein-coding gene Cytoband: 7q36.1
Entrez ID: 5919 HGNC ID: HGNC:9868 Ensembl Gene: ENSG00000106538 OMIM ID: 601973
Drug and gene relationship at DGIdb

 

Expression of RARRES2:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 RARRES2 5919 209496_at -0.1535 0.9307
GSE20347 RARRES2 5919 209496_at 0.8500 0.0031
GSE23400 RARRES2 5919 209496_at 0.2908 0.0724
GSE26886 RARRES2 5919 209496_at 1.5850 0.0020
GSE29001 RARRES2 5919 209496_at 0.2141 0.6380
GSE38129 RARRES2 5919 209496_at 0.3582 0.5038
GSE45670 RARRES2 5919 209496_at -1.4298 0.0017
GSE53622 RARRES2 5919 112642 0.5194 0.0030
GSE53624 RARRES2 5919 112642 0.5393 0.0006
GSE63941 RARRES2 5919 209496_at -6.0581 0.0000
GSE77861 RARRES2 5919 209496_at 0.3232 0.2210
GSE97050 RARRES2 5919 A_23_P134237 -0.0146 0.9725
SRP007169 RARRES2 5919 RNAseq 3.5429 0.0000
SRP008496 RARRES2 5919 RNAseq 5.0164 0.0000
SRP064894 RARRES2 5919 RNAseq 0.5073 0.2193
SRP133303 RARRES2 5919 RNAseq 1.1071 0.0011
SRP159526 RARRES2 5919 RNAseq 0.5457 0.0323
SRP193095 RARRES2 5919 RNAseq 1.7263 0.0001
SRP219564 RARRES2 5919 RNAseq 0.1380 0.8734
TCGA RARRES2 5919 RNAseq -0.2232 0.1109

Upregulated datasets: 5; Downregulated datasets: 2.  


 

Survival by RARRES2 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of RARRES2:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 RARRES2 5919 2 4 24
GSE20123 RARRES2 5919 2 4 24
GSE43470 RARRES2 5919 2 5 36
GSE46452 RARRES2 5919 7 2 50
GSE47630 RARRES2 5919 6 8 26
GSE54993 RARRES2 5919 3 3 64
GSE54994 RARRES2 5919 6 8 39
GSE60625 RARRES2 5919 0 0 11
GSE74703 RARRES2 5919 2 4 30
GSE74704 RARRES2 5919 1 4 15
TCGA RARRES2 5919 25 27 44

Total number of gains: 56; Total number of losses: 69; Total Number of normals: 363.  


 

Somatic mutations of RARRES2:

 

Generating mutation plots.

 

Highly correlated genes for RARRES2:

 

Showing top 20/857 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
RARRES2ISLR0.77308113013
RARRES2CTSK0.77192412012
RARRES2FBN10.770721009
RARRES2CNRIP10.766111808
RARRES2EMILIN10.75942413013
RARRES2LAMA40.75450111011
RARRES2EFEMP20.75301112012
RARRES2C11orf960.752836404
RARRES2DNM3OS0.752646403
RARRES2OLFML10.749511011
RARRES2PCOLCE0.74428812012
RARRES2TMEM1190.743007808
RARRES2DCN0.74237812012
RARRES2COL6A20.7380812012
RARRES2MMP20.7374311009
RARRES2AEBP10.73197413012
RARRES2GREM10.73117113013
RARRES2SGCD0.730446808
RARRES2FILIP1L0.72941112012
RARRES2OLFML30.72933213012

For details and further investigation, click here