NDFIP2

 

Full name: Nedd4 family interacting protein 2 Alias Symbol: KIAA1165|N4wbp5a
Type: protein-coding gene Cytoband: 13q31.1
Entrez ID: 54602 HGNC ID: HGNC:18537 Ensembl Gene: ENSG00000102471 OMIM ID: 610041
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of NDFIP2:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 NDFIP2 54602 224802_at -0.3211 0.7185
GSE26886 NDFIP2 54602 224802_at -0.9510 0.0008
GSE45670 NDFIP2 54602 224802_at -0.0761 0.8076
GSE53622 NDFIP2 54602 89968 -0.4108 0.0022
GSE53624 NDFIP2 54602 89968 -0.7396 0.0000
GSE63941 NDFIP2 54602 224802_at 0.0888 0.8887
GSE77861 NDFIP2 54602 224799_at -1.4423 0.0008
GSE97050 NDFIP2 54602 A_24_P264909 0.0174 0.9891
SRP007169 NDFIP2 54602 RNAseq -2.3723 0.0000
SRP008496 NDFIP2 54602 RNAseq -1.8899 0.0000
SRP064894 NDFIP2 54602 RNAseq -1.4974 0.0000
SRP133303 NDFIP2 54602 RNAseq -0.0929 0.7682
SRP159526 NDFIP2 54602 RNAseq -1.6996 0.0014
SRP193095 NDFIP2 54602 RNAseq -1.2321 0.0000
SRP219564 NDFIP2 54602 RNAseq -1.4788 0.0575
TCGA NDFIP2 54602 RNAseq 0.0183 0.7908

Upregulated datasets: 0; Downregulated datasets: 6.  


 

Survival by NDFIP2 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of NDFIP2:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 NDFIP2 54602 3 11 16
GSE20123 NDFIP2 54602 3 10 17
GSE43470 NDFIP2 54602 3 11 29
GSE46452 NDFIP2 54602 0 32 27
GSE47630 NDFIP2 54602 3 27 10
GSE54993 NDFIP2 54602 11 3 56
GSE54994 NDFIP2 54602 3 14 36
GSE60625 NDFIP2 54602 0 3 8
GSE74703 NDFIP2 54602 2 9 25
GSE74704 NDFIP2 54602 1 9 10
TCGA NDFIP2 54602 11 34 51

Total number of gains: 40; Total number of losses: 163; Total Number of normals: 285.  


 

Somatic mutations of NDFIP2:

 

Generating mutation plots.

 

Highly correlated genes for NDFIP2:

 

Showing top 20/1158 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
NDFIP2MBNL30.759562303
NDFIP2PAIP2B0.755614303
NDFIP2ZCCHC100.749734404
NDFIP2TRAPPC130.742983303
NDFIP2PRKAB10.738507303
NDFIP2HPSE0.737808505
NDFIP2PPIP5K20.735832404
NDFIP2SLC30A90.734039404
NDFIP2STRN0.730351505
NDFIP2GALE0.726164505
NDFIP2KIF21A0.726014404
NDFIP2CUL4B0.725765303
NDFIP2PDIK1L0.725037303
NDFIP2SLC31A10.724828303
NDFIP2PRRC10.724544404
NDFIP2SLCO2B10.720273303
NDFIP2ALG130.719711303
NDFIP2FRMD4B0.719366706
NDFIP2C3orf380.716487505
NDFIP2FAM174A0.7162504

For details and further investigation, click here