SLCO2B1

 

Full name: solute carrier organic anion transporter family member 2B1 Alias Symbol: OATP-B|OATP2B1
Type: protein-coding gene Cytoband: 11q13
Entrez ID: 11309 HGNC ID: HGNC:10962 Ensembl Gene: ENSG00000137491 OMIM ID: 604988
Drug and gene relationship at DGIdb

 

Expression of SLCO2B1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 SLCO2B1 11309 203473_at -0.6553 0.3780
GSE20347 SLCO2B1 11309 203473_at -0.6533 0.0001
GSE23400 SLCO2B1 11309 203473_at -0.1366 0.0443
GSE26886 SLCO2B1 11309 203473_at -1.6777 0.0000
GSE29001 SLCO2B1 11309 203473_at -0.3208 0.1628
GSE38129 SLCO2B1 11309 203473_at -0.5864 0.0003
GSE45670 SLCO2B1 11309 203473_at -0.9998 0.0001
GSE53622 SLCO2B1 11309 173898 -0.5578 0.0000
GSE53624 SLCO2B1 11309 173898 -0.7369 0.0000
GSE63941 SLCO2B1 11309 211557_x_at 0.2653 0.0691
GSE77861 SLCO2B1 11309 211557_x_at -0.3716 0.0099
GSE97050 SLCO2B1 11309 A_23_P150768 0.4710 0.4395
SRP007169 SLCO2B1 11309 RNAseq 0.2909 0.6359
SRP008496 SLCO2B1 11309 RNAseq 0.0168 0.9671
SRP064894 SLCO2B1 11309 RNAseq 0.7097 0.0383
SRP133303 SLCO2B1 11309 RNAseq 0.0267 0.9272
SRP159526 SLCO2B1 11309 RNAseq -0.7250 0.2565
SRP193095 SLCO2B1 11309 RNAseq -0.4440 0.0371
SRP219564 SLCO2B1 11309 RNAseq 0.9468 0.0693
TCGA SLCO2B1 11309 RNAseq -0.1988 0.1501

Upregulated datasets: 0; Downregulated datasets: 1.  


 

Survival by SLCO2B1 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of SLCO2B1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 SLCO2B1 11309 6 8 16
GSE20123 SLCO2B1 11309 6 7 17
GSE43470 SLCO2B1 11309 5 4 34
GSE46452 SLCO2B1 11309 7 22 30
GSE47630 SLCO2B1 11309 6 14 20
GSE54993 SLCO2B1 11309 8 2 60
GSE54994 SLCO2B1 11309 7 16 30
GSE60625 SLCO2B1 11309 4 3 4
GSE74703 SLCO2B1 11309 4 3 29
GSE74704 SLCO2B1 11309 4 3 13
TCGA SLCO2B1 11309 21 33 42

Total number of gains: 78; Total number of losses: 115; Total Number of normals: 295.  


 

Somatic mutations of SLCO2B1:

 

Generating mutation plots.

 

Highly correlated genes for SLCO2B1:

 

Showing top 20/1179 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
SLCO2B1TNFSF80.757518404
SLCO2B1GIMAP50.757283404
SLCO2B1TBC1D22B0.745843303
SLCO2B1KDM5D0.735462303
SLCO2B1ARHGAP150.735219404
SLCO2B1IER3IP10.734617303
SLCO2B1SFTA20.721778404
SLCO2B1NDFIP20.720273303
SLCO2B1CPA40.719584404
SLCO2B1GIMAP70.719172706
SLCO2B1ZNF8440.711448404
SLCO2B1UNC5B0.708299303
SLCO2B1ARPC20.704781605
SLCO2B1SPNS20.704353404
SLCO2B1UTY0.703759303
SLCO2B1GIMAP10.702965706
SLCO2B1TIFA0.700894606
SLCO2B1MPEG10.700398606
SLCO2B1HOXA20.69706303
SLCO2B1ANKRD220.695394303

For details and further investigation, click here