FRMD4B

 

Full name: FERM domain containing 4B Alias Symbol: KIAA1013|GRSP1
Type: protein-coding gene Cytoband: 3p14.1
Entrez ID: 23150 HGNC ID: HGNC:24886 Ensembl Gene: ENSG00000114541 OMIM ID: 617467
Drug and gene relationship at DGIdb

 

Expression of FRMD4B:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 FRMD4B 23150 213056_at -0.9837 0.3817
GSE20347 FRMD4B 23150 213056_at -2.0334 0.0000
GSE23400 FRMD4B 23150 213056_at -1.3972 0.0000
GSE26886 FRMD4B 23150 213056_at -2.3533 0.0000
GSE29001 FRMD4B 23150 213056_at -1.4847 0.0000
GSE38129 FRMD4B 23150 213056_at -1.3644 0.0001
GSE45670 FRMD4B 23150 213056_at -0.5570 0.0398
GSE53622 FRMD4B 23150 85189 -1.1263 0.0000
GSE53624 FRMD4B 23150 85189 -1.6056 0.0000
GSE63941 FRMD4B 23150 213056_at 3.4090 0.0003
GSE77861 FRMD4B 23150 213056_at -1.6161 0.0005
GSE97050 FRMD4B 23150 A_33_P3446495 -0.3215 0.5506
SRP007169 FRMD4B 23150 RNAseq -2.8586 0.0000
SRP008496 FRMD4B 23150 RNAseq -2.2716 0.0000
SRP064894 FRMD4B 23150 RNAseq -2.0153 0.0000
SRP133303 FRMD4B 23150 RNAseq -1.4535 0.0000
SRP159526 FRMD4B 23150 RNAseq -1.7666 0.0000
SRP193095 FRMD4B 23150 RNAseq -1.4651 0.0000
SRP219564 FRMD4B 23150 RNAseq -1.9379 0.0039
TCGA FRMD4B 23150 RNAseq 0.0093 0.9105

Upregulated datasets: 1; Downregulated datasets: 15.  


 

Survival by FRMD4B expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of FRMD4B:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 FRMD4B 23150 1 19 10
GSE20123 FRMD4B 23150 1 19 10
GSE43470 FRMD4B 23150 0 20 23
GSE46452 FRMD4B 23150 2 17 40
GSE47630 FRMD4B 23150 1 23 16
GSE54993 FRMD4B 23150 5 3 62
GSE54994 FRMD4B 23150 1 33 19
GSE60625 FRMD4B 23150 3 1 7
GSE74703 FRMD4B 23150 0 16 20
GSE74704 FRMD4B 23150 1 13 6
TCGA FRMD4B 23150 0 79 17

Total number of gains: 15; Total number of losses: 243; Total Number of normals: 230.  


 

Somatic mutations of FRMD4B:

 

Generating mutation plots.

 

Highly correlated genes for FRMD4B:

 

Showing top 20/1563 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
FRMD4BPDCD6IP0.85312811011
FRMD4BRAB100.82656606
FRMD4BTJP10.81938111011
FRMD4BSFTA20.818041404
FRMD4BCDS10.81750311011
FRMD4BSNX240.817399909
FRMD4BACPP0.81562110010
FRMD4BCAST0.81328311011
FRMD4BC1orf1160.81124411011
FRMD4BTMEM1540.807883606
FRMD4BTMOD30.80742811010
FRMD4BTAB30.806616707
FRMD4BSERPINB10.8062111011
FRMD4BCLIC30.805858908
FRMD4BZNF1850.8054210010
FRMD4BCWH430.80521410010
FRMD4BCES20.804447808
FRMD4BRANBP90.8043311011
FRMD4BPADI10.803015909
FRMD4BVPS4B0.80298911011

For details and further investigation, click here