NFATC4

 

Full name: nuclear factor of activated T cells 4 Alias Symbol: NFAT3
Type: protein-coding gene Cytoband: 14q12
Entrez ID: 4776 HGNC ID: HGNC:7778 Ensembl Gene: ENSG00000100968 OMIM ID: 602699
Drug and gene relationship at DGIdb

 

NFATC4 involved pathways:

KEGG pathway Description View
hsa04022cGMP-PKG signaling pathway
hsa04310Wnt signaling pathway
hsa04360Axon guidance
hsa04921Oxytocin signaling pathway
hsa05161Hepatitis B
hsa05166HTLV-I infection

 

Expression of NFATC4:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 NFATC4 4776 213345_at 0.0089 0.9801
GSE20347 NFATC4 4776 213345_at 0.1002 0.2966
GSE23400 NFATC4 4776 205897_at -0.1976 0.0000
GSE26886 NFATC4 4776 213345_at 0.6289 0.0007
GSE29001 NFATC4 4776 213345_at 0.1064 0.7152
GSE38129 NFATC4 4776 213345_at -0.0455 0.5971
GSE45670 NFATC4 4776 213345_at -0.1903 0.0949
GSE53622 NFATC4 4776 80708 -1.0796 0.0000
GSE53624 NFATC4 4776 80708 -0.8833 0.0000
GSE63941 NFATC4 4776 213345_at -0.8476 0.0085
GSE77861 NFATC4 4776 213345_at -0.1905 0.3516
GSE97050 NFATC4 4776 A_33_P3250083 -0.5471 0.1726
SRP007169 NFATC4 4776 RNAseq 1.8011 0.0098
SRP064894 NFATC4 4776 RNAseq 0.2164 0.3813
SRP133303 NFATC4 4776 RNAseq -0.4373 0.1436
SRP159526 NFATC4 4776 RNAseq 0.2409 0.5610
SRP193095 NFATC4 4776 RNAseq 1.5253 0.0000
SRP219564 NFATC4 4776 RNAseq -0.1318 0.8223
TCGA NFATC4 4776 RNAseq -0.3576 0.0042

Upregulated datasets: 2; Downregulated datasets: 1.  


 

Survival by NFATC4 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of NFATC4:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 NFATC4 4776 8 3 19
GSE20123 NFATC4 4776 8 3 19
GSE43470 NFATC4 4776 8 2 33
GSE46452 NFATC4 4776 16 2 41
GSE47630 NFATC4 4776 11 10 19
GSE54993 NFATC4 4776 3 11 56
GSE54994 NFATC4 4776 18 5 30
GSE60625 NFATC4 4776 0 2 9
GSE74703 NFATC4 4776 7 2 27
GSE74704 NFATC4 4776 3 2 15
TCGA NFATC4 4776 27 12 57

Total number of gains: 109; Total number of losses: 54; Total Number of normals: 325.  


 

Somatic mutations of NFATC4:

 

Generating mutation plots.

 

Highly correlated genes for NFATC4:

 

Showing top 20/727 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
NFATC4TNFSF120.84474303
NFATC4TCEAL10.831512303
NFATC4AKAP60.777431303
NFATC4CLEC3B0.774382303
NFATC4TCEAL60.767112303
NFATC4C19orf470.755493303
NFATC4CYP21A20.744848303
NFATC4GPRASP20.742446303
NFATC4ZEB10.741034303
NFATC4AP1S20.740454303
NFATC4SLC39A30.738178303
NFATC4NR2F10.734909303
NFATC4RBM380.72812303
NFATC4KLHL300.728018303
NFATC4EID10.725543404
NFATC4RHOJ0.721737403
NFATC4FNDC50.715024303
NFATC4CTSO0.713401404
NFATC4PARD3B0.712937505
NFATC4PIEZO10.711247303

For details and further investigation, click here