| Full name: chromosome 19 open reading frame 47 | Alias Symbol: FLJ36888 | ||
| Type: protein-coding gene | Cytoband: 19q13.2 | ||
| Entrez ID: 126526 | HGNC ID: HGNC:26723 | Ensembl Gene: ENSG00000160392 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of C19orf47:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | C19orf47 | 126526 | 234999_at | 0.0350 | 0.9135 | |
| GSE26886 | C19orf47 | 126526 | 234999_at | 0.2516 | 0.0316 | |
| GSE45670 | C19orf47 | 126526 | 234999_at | 0.0629 | 0.4568 | |
| GSE53622 | C19orf47 | 126526 | 71482 | 0.0749 | 0.3999 | |
| GSE53624 | C19orf47 | 126526 | 71482 | 0.2162 | 0.0027 | |
| GSE63941 | C19orf47 | 126526 | 234999_at | -0.2425 | 0.0876 | |
| GSE77861 | C19orf47 | 126526 | 234999_at | -0.0394 | 0.7481 | |
| GSE97050 | C19orf47 | 126526 | A_32_P505133 | 0.1227 | 0.6428 | |
| SRP007169 | C19orf47 | 126526 | RNAseq | -0.5249 | 0.1919 | |
| SRP008496 | C19orf47 | 126526 | RNAseq | -0.7666 | 0.0189 | |
| SRP064894 | C19orf47 | 126526 | RNAseq | 0.5727 | 0.0307 | |
| SRP133303 | C19orf47 | 126526 | RNAseq | 0.2145 | 0.2827 | |
| SRP159526 | C19orf47 | 126526 | RNAseq | 0.4906 | 0.0596 | |
| SRP193095 | C19orf47 | 126526 | RNAseq | 0.3059 | 0.0024 | |
| SRP219564 | C19orf47 | 126526 | RNAseq | 0.3192 | 0.2002 | |
| TCGA | C19orf47 | 126526 | RNAseq | 0.2113 | 0.0004 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by C19orf47 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of C19orf47:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | C19orf47 | 126526 | 6 | 5 | 19 | |
| GSE20123 | C19orf47 | 126526 | 6 | 4 | 20 | |
| GSE43470 | C19orf47 | 126526 | 3 | 9 | 31 | |
| GSE46452 | C19orf47 | 126526 | 48 | 1 | 10 | |
| GSE47630 | C19orf47 | 126526 | 9 | 5 | 26 | |
| GSE54993 | C19orf47 | 126526 | 17 | 3 | 50 | |
| GSE54994 | C19orf47 | 126526 | 8 | 9 | 36 | |
| GSE60625 | C19orf47 | 126526 | 9 | 0 | 2 | |
| GSE74703 | C19orf47 | 126526 | 3 | 6 | 27 | |
| GSE74704 | C19orf47 | 126526 | 6 | 2 | 12 | |
| TCGA | C19orf47 | 126526 | 14 | 16 | 66 |
Total number of gains: 129; Total number of losses: 60; Total Number of normals: 299.
Somatic mutations of C19orf47:
Generating mutation plots.
Highly correlated genes for C19orf47:
Showing top 20/170 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| C19orf47 | XRRA1 | 0.836682 | 3 | 0 | 3 |
| C19orf47 | NFATC4 | 0.755493 | 3 | 0 | 3 |
| C19orf47 | ZNF358 | 0.752101 | 3 | 0 | 3 |
| C19orf47 | TRIM61 | 0.740911 | 3 | 0 | 3 |
| C19orf47 | DCTN1 | 0.740791 | 3 | 0 | 3 |
| C19orf47 | WDR4 | 0.726906 | 3 | 0 | 3 |
| C19orf47 | G6PC3 | 0.717749 | 3 | 0 | 3 |
| C19orf47 | NPFF | 0.715975 | 3 | 0 | 3 |
| C19orf47 | MID1IP1 | 0.710948 | 3 | 0 | 3 |
| C19orf47 | FHL3 | 0.707758 | 3 | 0 | 3 |
| C19orf47 | LGI2 | 0.701916 | 3 | 0 | 3 |
| C19orf47 | CREB5 | 0.698237 | 3 | 0 | 3 |
| C19orf47 | JMJD4 | 0.69544 | 3 | 0 | 3 |
| C19orf47 | PTP4A3 | 0.693929 | 3 | 0 | 3 |
| C19orf47 | BEGAIN | 0.69063 | 3 | 0 | 3 |
| C19orf47 | AP3D1 | 0.689273 | 4 | 0 | 4 |
| C19orf47 | WTIP | 0.685356 | 4 | 0 | 4 |
| C19orf47 | PIAS4 | 0.682228 | 5 | 0 | 5 |
| C19orf47 | CXCR5 | 0.681675 | 3 | 0 | 3 |
| C19orf47 | IL3RA | 0.681568 | 4 | 0 | 4 |
For details and further investigation, click here
