| Full name: nipsnap homolog 1 | Alias Symbol: | ||
| Type: protein-coding gene | Cytoband: 22q12.2 | ||
| Entrez ID: 8508 | HGNC ID: HGNC:7827 | Ensembl Gene: ENSG00000184117 | OMIM ID: 603249 |
| Drug and gene relationship at DGIdb | |||
Expression of NIPSNAP1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | NIPSNAP1 | 8508 | 201709_s_at | 0.1303 | 0.7405 | |
| GSE20347 | NIPSNAP1 | 8508 | 201709_s_at | 0.3820 | 0.0035 | |
| GSE23400 | NIPSNAP1 | 8508 | 201709_s_at | 0.2784 | 0.0000 | |
| GSE26886 | NIPSNAP1 | 8508 | 201709_s_at | 0.8038 | 0.0000 | |
| GSE29001 | NIPSNAP1 | 8508 | 201709_s_at | 0.1585 | 0.4539 | |
| GSE38129 | NIPSNAP1 | 8508 | 201709_s_at | 0.4404 | 0.0001 | |
| GSE45670 | NIPSNAP1 | 8508 | 201709_s_at | 0.4856 | 0.0134 | |
| GSE53622 | NIPSNAP1 | 8508 | 15623 | 0.7538 | 0.0000 | |
| GSE53624 | NIPSNAP1 | 8508 | 15623 | 0.7790 | 0.0000 | |
| GSE63941 | NIPSNAP1 | 8508 | 201709_s_at | 1.0539 | 0.0184 | |
| GSE77861 | NIPSNAP1 | 8508 | 201709_s_at | 0.3758 | 0.1072 | |
| GSE97050 | NIPSNAP1 | 8508 | A_23_P120860 | 0.4229 | 0.1873 | |
| SRP007169 | NIPSNAP1 | 8508 | RNAseq | 1.2801 | 0.0002 | |
| SRP008496 | NIPSNAP1 | 8508 | RNAseq | 0.9928 | 0.0001 | |
| SRP064894 | NIPSNAP1 | 8508 | RNAseq | 0.6675 | 0.0010 | |
| SRP133303 | NIPSNAP1 | 8508 | RNAseq | 0.5189 | 0.0357 | |
| SRP159526 | NIPSNAP1 | 8508 | RNAseq | 1.1072 | 0.0000 | |
| SRP193095 | NIPSNAP1 | 8508 | RNAseq | 0.2036 | 0.1934 | |
| SRP219564 | NIPSNAP1 | 8508 | RNAseq | 0.5513 | 0.2833 | |
| TCGA | NIPSNAP1 | 8508 | RNAseq | 0.1207 | 0.0525 |
Upregulated datasets: 3; Downregulated datasets: 0.
Survival by NIPSNAP1 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of NIPSNAP1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | NIPSNAP1 | 8508 | 3 | 5 | 22 | |
| GSE20123 | NIPSNAP1 | 8508 | 3 | 4 | 23 | |
| GSE43470 | NIPSNAP1 | 8508 | 4 | 5 | 34 | |
| GSE46452 | NIPSNAP1 | 8508 | 31 | 1 | 27 | |
| GSE47630 | NIPSNAP1 | 8508 | 8 | 5 | 27 | |
| GSE54993 | NIPSNAP1 | 8508 | 3 | 6 | 61 | |
| GSE54994 | NIPSNAP1 | 8508 | 11 | 8 | 34 | |
| GSE60625 | NIPSNAP1 | 8508 | 5 | 0 | 6 | |
| GSE74703 | NIPSNAP1 | 8508 | 4 | 4 | 28 | |
| GSE74704 | NIPSNAP1 | 8508 | 0 | 1 | 19 | |
| TCGA | NIPSNAP1 | 8508 | 27 | 15 | 54 |
Total number of gains: 99; Total number of losses: 54; Total Number of normals: 335.
Somatic mutations of NIPSNAP1:
Generating mutation plots.
Highly correlated genes for NIPSNAP1:
Showing top 20/1224 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| NIPSNAP1 | FBXO11 | 0.795976 | 3 | 0 | 3 |
| NIPSNAP1 | WIPF2 | 0.790182 | 3 | 0 | 3 |
| NIPSNAP1 | TMEM54 | 0.777016 | 4 | 0 | 3 |
| NIPSNAP1 | EDC4 | 0.768152 | 5 | 0 | 5 |
| NIPSNAP1 | LSM10 | 0.75704 | 3 | 0 | 3 |
| NIPSNAP1 | NACC1 | 0.743061 | 4 | 0 | 4 |
| NIPSNAP1 | MRPL38 | 0.740322 | 3 | 0 | 3 |
| NIPSNAP1 | C2orf68 | 0.740301 | 3 | 0 | 3 |
| NIPSNAP1 | KRTCAP2 | 0.710172 | 3 | 0 | 3 |
| NIPSNAP1 | GAS2L1 | 0.702763 | 5 | 0 | 5 |
| NIPSNAP1 | STRADA | 0.698837 | 3 | 0 | 3 |
| NIPSNAP1 | SYNE2 | 0.697625 | 3 | 0 | 3 |
| NIPSNAP1 | NADSYN1 | 0.694591 | 3 | 0 | 3 |
| NIPSNAP1 | POU2F1 | 0.687271 | 5 | 0 | 5 |
| NIPSNAP1 | ST6GAL1 | 0.686914 | 3 | 0 | 3 |
| NIPSNAP1 | TPM3 | 0.683198 | 4 | 0 | 3 |
| NIPSNAP1 | BAD | 0.682485 | 3 | 0 | 3 |
| NIPSNAP1 | TMEM18 | 0.682221 | 3 | 0 | 3 |
| NIPSNAP1 | C12orf65 | 0.681998 | 3 | 0 | 3 |
| NIPSNAP1 | AP1S3 | 0.68023 | 3 | 0 | 3 |
For details and further investigation, click here
