NOB1

 

Full name: NIN1 (RPN12) binding protein 1 homolog Alias Symbol: NOB1P|ART-4|MST158
Type: protein-coding gene Cytoband: 16q22.1
Entrez ID: 28987 HGNC ID: HGNC:29540 Ensembl Gene: ENSG00000141101 OMIM ID: 613586
Drug and gene relationship at DGIdb
Screen Evidence:

 

Expression of NOB1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 NOB1 28987 223018_at 0.3667 0.3841
GSE26886 NOB1 28987 223018_at 0.9972 0.0000
GSE45670 NOB1 28987 223018_at 0.0947 0.5149
GSE63941 NOB1 28987 223018_at 1.6079 0.0011
GSE77861 NOB1 28987 223018_at 0.3478 0.2631
GSE97050 NOB1 28987 A_23_P106822 0.5674 0.2319
SRP007169 NOB1 28987 RNAseq 0.1169 0.7381
SRP008496 NOB1 28987 RNAseq 0.0533 0.8438
SRP064894 NOB1 28987 RNAseq -0.0470 0.8034
SRP133303 NOB1 28987 RNAseq 0.3368 0.0553
SRP159526 NOB1 28987 RNAseq 0.3449 0.1455
SRP193095 NOB1 28987 RNAseq 0.2220 0.1583
SRP219564 NOB1 28987 RNAseq 0.0630 0.8510
TCGA NOB1 28987 RNAseq 0.1769 0.0011

Upregulated datasets: 1; Downregulated datasets: 0.  


 

Survival by NOB1 expression:

 

TCGA

 

Note: Click image to view full size file.  


Copy number change of NOB1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 NOB1 28987 8 1 21
GSE20123 NOB1 28987 8 1 21
GSE43470 NOB1 28987 2 8 33
GSE46452 NOB1 28987 38 1 20
GSE47630 NOB1 28987 11 8 21
GSE54993 NOB1 28987 2 4 64
GSE54994 NOB1 28987 8 10 35
GSE60625 NOB1 28987 4 0 7
GSE74703 NOB1 28987 2 5 29
GSE74704 NOB1 28987 4 0 16
TCGA NOB1 28987 28 13 55

Total number of gains: 115; Total number of losses: 51; Total Number of normals: 322.  


 

Somatic mutations of NOB1:

 

Generating mutation plots.

 

Highly correlated genes for NOB1:

 

Showing top 20/510 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
NOB1NUP930.762757404
NOB1FAM192A0.753715404
NOB1PRSS210.747313303
NOB1HOXD110.723766303
NOB1GPR1760.721863303
NOB1NME30.715919303
NOB1PDPR0.713889303
NOB1EXOSC20.712776403
NOB1NFKBIE0.711302303
NOB1ODF3B0.711129303
NOB1TXNDC120.699189404
NOB1LAMB30.698561504
NOB1ZSCAN210.694472303
NOB1RNF1260.689444303
NOB1ZNHIT10.688474303
NOB1POLR2C0.68823504
NOB1SLC13A50.680734303
NOB1RPS6KA10.678947504
NOB1RBBP80.67721504
NOB1IQCB10.675793303

For details and further investigation, click here