| Full name: ring finger protein 19B | Alias Symbol: FLJ90005 | ||
| Type: protein-coding gene | Cytoband: 1p35.1 | ||
| Entrez ID: 127544 | HGNC ID: HGNC:26886 | Ensembl Gene: ENSG00000116514 | OMIM ID: 610872 |
| Drug and gene relationship at DGIdb | |||
Expression of RNF19B:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | RNF19B | 127544 | 36564_at | 0.0900 | 0.8935 | |
| GSE20347 | RNF19B | 127544 | 213038_at | -0.2836 | 0.1452 | |
| GSE23400 | RNF19B | 127544 | 36564_at | -0.1575 | 0.1587 | |
| GSE26886 | RNF19B | 127544 | 213038_at | -0.6526 | 0.0024 | |
| GSE29001 | RNF19B | 127544 | 36564_at | -0.2790 | 0.1540 | |
| GSE38129 | RNF19B | 127544 | 213038_at | -0.0325 | 0.8863 | |
| GSE45670 | RNF19B | 127544 | 36564_at | 0.4091 | 0.0209 | |
| GSE53622 | RNF19B | 127544 | 89792 | 0.1721 | 0.1065 | |
| GSE53624 | RNF19B | 127544 | 89792 | 0.1321 | 0.1103 | |
| GSE63941 | RNF19B | 127544 | 213038_at | 1.2606 | 0.0061 | |
| GSE77861 | RNF19B | 127544 | 36564_at | -0.2234 | 0.5394 | |
| GSE97050 | RNF19B | 127544 | A_23_P321388 | 0.4335 | 0.2454 | |
| SRP007169 | RNF19B | 127544 | RNAseq | -1.4900 | 0.0004 | |
| SRP008496 | RNF19B | 127544 | RNAseq | -1.3748 | 0.0000 | |
| SRP064894 | RNF19B | 127544 | RNAseq | -0.3480 | 0.1365 | |
| SRP133303 | RNF19B | 127544 | RNAseq | 0.6068 | 0.0209 | |
| SRP159526 | RNF19B | 127544 | RNAseq | -0.2839 | 0.2870 | |
| SRP193095 | RNF19B | 127544 | RNAseq | -0.0887 | 0.6252 | |
| SRP219564 | RNF19B | 127544 | RNAseq | -0.3896 | 0.5568 | |
| TCGA | RNF19B | 127544 | RNAseq | 0.2256 | 0.0002 |
Upregulated datasets: 1; Downregulated datasets: 2.
Survival by RNF19B expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of RNF19B:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | RNF19B | 127544 | 2 | 5 | 23 | |
| GSE20123 | RNF19B | 127544 | 2 | 4 | 24 | |
| GSE43470 | RNF19B | 127544 | 5 | 6 | 32 | |
| GSE46452 | RNF19B | 127544 | 5 | 1 | 53 | |
| GSE47630 | RNF19B | 127544 | 8 | 3 | 29 | |
| GSE54993 | RNF19B | 127544 | 1 | 1 | 68 | |
| GSE54994 | RNF19B | 127544 | 11 | 2 | 40 | |
| GSE60625 | RNF19B | 127544 | 0 | 0 | 11 | |
| GSE74703 | RNF19B | 127544 | 4 | 3 | 29 | |
| GSE74704 | RNF19B | 127544 | 1 | 0 | 19 | |
| TCGA | RNF19B | 127544 | 12 | 18 | 66 |
Total number of gains: 51; Total number of losses: 43; Total Number of normals: 394.
Somatic mutations of RNF19B:
Generating mutation plots.
Highly correlated genes for RNF19B:
Showing top 20/358 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| RNF19B | CHD2 | 0.774801 | 3 | 0 | 3 |
| RNF19B | TMEM69 | 0.715876 | 3 | 0 | 3 |
| RNF19B | PEX13 | 0.705538 | 3 | 0 | 3 |
| RNF19B | HMHB1 | 0.703556 | 3 | 0 | 3 |
| RNF19B | ATP6V1A | 0.693469 | 3 | 0 | 3 |
| RNF19B | CLDN1 | 0.690783 | 4 | 0 | 3 |
| RNF19B | GLTP | 0.671472 | 3 | 0 | 3 |
| RNF19B | JAG1 | 0.670387 | 4 | 0 | 3 |
| RNF19B | APH1A | 0.67033 | 4 | 0 | 4 |
| RNF19B | MAPK6 | 0.668538 | 3 | 0 | 3 |
| RNF19B | EFHD2 | 0.664761 | 4 | 0 | 4 |
| RNF19B | COL22A1 | 0.660485 | 3 | 0 | 3 |
| RNF19B | GJA8 | 0.659789 | 3 | 0 | 3 |
| RNF19B | WDR20 | 0.657862 | 3 | 0 | 3 |
| RNF19B | VPS25 | 0.655418 | 3 | 0 | 3 |
| RNF19B | PRRG4 | 0.653975 | 4 | 0 | 3 |
| RNF19B | HMGCS1 | 0.653897 | 3 | 0 | 3 |
| RNF19B | HAVCR1 | 0.65333 | 3 | 0 | 3 |
| RNF19B | LIPF | 0.648736 | 3 | 0 | 3 |
| RNF19B | SLC35A4 | 0.64828 | 4 | 0 | 4 |
For details and further investigation, click here
