PGM2

 

Full name: phosphoglucomutase 2 Alias Symbol: FLJ10983
Type: protein-coding gene Cytoband: 4p14
Entrez ID: 55276 HGNC ID: HGNC:8906 Ensembl Gene: ENSG00000169299 OMIM ID: 172000
Drug and gene relationship at DGIdb

 

Expression of PGM2:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 PGM2 55276 225367_at -0.4367 0.6554
GSE26886 PGM2 55276 225367_at -1.5578 0.0000
GSE45670 PGM2 55276 225367_at 0.0402 0.8817
GSE53622 PGM2 55276 105470 -0.9050 0.0000
GSE53624 PGM2 55276 105470 -1.1568 0.0000
GSE63941 PGM2 55276 225367_at 0.8416 0.1181
GSE77861 PGM2 55276 225367_at -1.0802 0.0052
GSE97050 PGM2 55276 A_23_P7172 -0.0800 0.7973
SRP007169 PGM2 55276 RNAseq -1.6013 0.0010
SRP008496 PGM2 55276 RNAseq -1.7397 0.0000
SRP064894 PGM2 55276 RNAseq -0.8796 0.0025
SRP133303 PGM2 55276 RNAseq -0.7509 0.0000
SRP159526 PGM2 55276 RNAseq -1.4588 0.0000
SRP193095 PGM2 55276 RNAseq -1.2862 0.0000
SRP219564 PGM2 55276 RNAseq -1.1512 0.0374
TCGA PGM2 55276 RNAseq 0.2469 0.0011

Upregulated datasets: 0; Downregulated datasets: 8.  


 

Survival by PGM2 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of PGM2:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 PGM2 55276 0 16 14
GSE20123 PGM2 55276 0 16 14
GSE43470 PGM2 55276 2 13 28
GSE46452 PGM2 55276 1 36 22
GSE47630 PGM2 55276 1 19 20
GSE54993 PGM2 55276 8 0 62
GSE54994 PGM2 55276 4 10 39
GSE60625 PGM2 55276 0 0 11
GSE74703 PGM2 55276 1 11 24
GSE74704 PGM2 55276 0 9 11
TCGA PGM2 55276 11 46 39

Total number of gains: 28; Total number of losses: 176; Total Number of normals: 284.  


 

Somatic mutations of PGM2:

 

Generating mutation plots.

 

Highly correlated genes for PGM2:

 

Showing top 20/1554 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
PGM2MKKS0.797125303
PGM2EPGN0.790477303
PGM2MTF10.790104505
PGM2NIPAL10.787099303
PGM2CCDC250.786148303
PGM2NUAK20.784426303
PGM2PRKCH0.783888505
PGM2TMEM790.774471707
PGM2TIAM10.770972707
PGM2CNFN0.770305605
PGM2CWH430.767609606
PGM2PRSS270.766777606
PGM2BTBD110.764406707
PGM2ARF60.763487606
PGM2MREG0.759824706
PGM2CCDC60.756971505
PGM2ERAP20.75677303
PGM2CERS30.756264707
PGM2IL22RA10.756049403
PGM2CAPN140.755806606

For details and further investigation, click here