PHLDB2

 

Full name: pleckstrin homology like domain family B member 2 Alias Symbol: LL5beta|FLJ21791|LL5b
Type: protein-coding gene Cytoband: 3q13.2
Entrez ID: 90102 HGNC ID: HGNC:29573 Ensembl Gene: ENSG00000144824 OMIM ID: 610298
Drug and gene relationship at DGIdb

 

Expression of PHLDB2:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 PHLDB2 90102 225688_s_at 0.5917 0.5707
GSE26886 PHLDB2 90102 225688_s_at 3.3822 0.0000
GSE45670 PHLDB2 90102 225688_s_at 0.7354 0.0680
GSE53622 PHLDB2 90102 41700 1.5471 0.0000
GSE53624 PHLDB2 90102 41700 1.8541 0.0000
GSE63941 PHLDB2 90102 225688_s_at -0.2060 0.8363
GSE77861 PHLDB2 90102 225688_s_at 3.4888 0.0003
GSE97050 PHLDB2 90102 A_24_P178065 0.9566 0.1450
SRP007169 PHLDB2 90102 RNAseq 4.3533 0.0000
SRP008496 PHLDB2 90102 RNAseq 4.5004 0.0000
SRP064894 PHLDB2 90102 RNAseq 1.2002 0.0000
SRP133303 PHLDB2 90102 RNAseq 1.7365 0.0000
SRP159526 PHLDB2 90102 RNAseq 1.5293 0.0140
SRP193095 PHLDB2 90102 RNAseq 2.6109 0.0000
SRP219564 PHLDB2 90102 RNAseq 0.6048 0.2828
TCGA PHLDB2 90102 RNAseq 0.1010 0.3376

Upregulated datasets: 10; Downregulated datasets: 0.  


 

Survival by PHLDB2 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of PHLDB2:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 PHLDB2 90102 19 1 10
GSE20123 PHLDB2 90102 19 1 10
GSE43470 PHLDB2 90102 20 1 22
GSE46452 PHLDB2 90102 12 6 41
GSE47630 PHLDB2 90102 16 6 18
GSE54993 PHLDB2 90102 2 5 63
GSE54994 PHLDB2 90102 29 4 20
GSE60625 PHLDB2 90102 0 6 5
GSE74703 PHLDB2 90102 16 1 19
GSE74704 PHLDB2 90102 13 1 6
TCGA PHLDB2 90102 52 9 35

Total number of gains: 198; Total number of losses: 41; Total Number of normals: 249.  


 

Somatic mutations of PHLDB2:

 

Generating mutation plots.

 

Highly correlated genes for PHLDB2:

 

Showing top 20/1344 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
PHLDB2DPYSL20.78691303
PHLDB2CCDC102B0.736653303
PHLDB2SLC4A20.735043303
PHLDB2AKR1B10.734629505
PHLDB2KLHL130.732101605
PHLDB2SLC20A10.731901303
PHLDB2C1orf2160.731128404
PHLDB2MRC10.730511303
PHLDB2GHDC0.723052303
PHLDB2ALKBH60.720533404
PHLDB2C1R0.72009303
PHLDB2MFHAS10.719724706
PHLDB2SDHAF20.718243303
PHLDB2KLF130.712694404
PHLDB2PTPRM0.712258303
PHLDB2CD2760.709351404
PHLDB2FEN10.707905303
PHLDB2UGGT10.707874303
PHLDB2HOMER30.706816504
PHLDB2TMEM132A0.704817404

For details and further investigation, click here