PLEKHG3

 

Full name: pleckstrin homology and RhoGEF domain containing G3 Alias Symbol: ARHGEF43
Type: protein-coding gene Cytoband: 14q23.3
Entrez ID: 26030 HGNC ID: HGNC:20364 Ensembl Gene: ENSG00000126822 OMIM ID: 617940
Drug and gene relationship at DGIdb

 

Expression of PLEKHG3:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 PLEKHG3 26030 212823_s_at 0.2038 0.6627
GSE20347 PLEKHG3 26030 212823_s_at 0.0682 0.6037
GSE23400 PLEKHG3 26030 212823_s_at 0.1270 0.0179
GSE26886 PLEKHG3 26030 212823_s_at 0.4547 0.0038
GSE29001 PLEKHG3 26030 212823_s_at -0.0656 0.7840
GSE38129 PLEKHG3 26030 212823_s_at 0.1459 0.3067
GSE45670 PLEKHG3 26030 212823_s_at 0.2353 0.0809
GSE53622 PLEKHG3 26030 38302 -0.1573 0.1313
GSE53624 PLEKHG3 26030 38302 0.0247 0.7353
GSE63941 PLEKHG3 26030 212823_s_at 1.2354 0.0005
GSE77861 PLEKHG3 26030 212823_s_at 0.1577 0.5422
GSE97050 PLEKHG3 26030 A_23_P76901 -0.0083 0.9762
SRP007169 PLEKHG3 26030 RNAseq 0.7989 0.0453
SRP008496 PLEKHG3 26030 RNAseq 0.8338 0.0004
SRP064894 PLEKHG3 26030 RNAseq 0.3046 0.2618
SRP133303 PLEKHG3 26030 RNAseq 0.3022 0.3318
SRP159526 PLEKHG3 26030 RNAseq -0.0546 0.9137
SRP193095 PLEKHG3 26030 RNAseq 0.5446 0.0009
SRP219564 PLEKHG3 26030 RNAseq 0.2738 0.6537
TCGA PLEKHG3 26030 RNAseq 0.1506 0.0383

Upregulated datasets: 1; Downregulated datasets: 0.  


 

Survival by PLEKHG3 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of PLEKHG3:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 PLEKHG3 26030 7 3 20
GSE20123 PLEKHG3 26030 7 3 20
GSE43470 PLEKHG3 26030 8 2 33
GSE46452 PLEKHG3 26030 16 3 40
GSE47630 PLEKHG3 26030 11 9 20
GSE54993 PLEKHG3 26030 3 9 58
GSE54994 PLEKHG3 26030 18 5 30
GSE60625 PLEKHG3 26030 0 2 9
GSE74703 PLEKHG3 26030 7 2 27
GSE74704 PLEKHG3 26030 3 2 15
TCGA PLEKHG3 26030 32 14 50

Total number of gains: 112; Total number of losses: 54; Total Number of normals: 322.  


 

Somatic mutations of PLEKHG3:

 

Generating mutation plots.

 

Highly correlated genes for PLEKHG3:

 

Showing top 20/414 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
PLEKHG3CD220.733309303
PLEKHG3CCNA10.728138303
PLEKHG3LSG10.688066303
PLEKHG3DMAP10.683439303
PLEKHG3NUDT140.672882403
PLEKHG3INO80B0.656568605
PLEKHG3TIGD10.653932404
PLEKHG3FAM110C0.649387303
PLEKHG3DND10.648373303
PLEKHG3RPL80.647768503
PLEKHG3C6orf1630.640695303
PLEKHG3NCOA60.639171403
PLEKHG3OR12D20.635137303
PLEKHG3GGA20.63429403
PLEKHG3DVL20.634092303
PLEKHG3PIGL0.632252706
PLEKHG3IRF2BPL0.631802303
PLEKHG3NEURL1B0.631309303
PLEKHG3MXD30.628283303
PLEKHG3PKM0.627813504

For details and further investigation, click here