ARPC3

 

Full name: actin related protein 2/3 complex subunit 3 Alias Symbol: p21-Arc|ARC21
Type: protein-coding gene Cytoband: 12q24.11
Entrez ID: 10094 HGNC ID: HGNC:706 Ensembl Gene: ENSG00000111229 OMIM ID: 604225
Drug and gene relationship at DGIdb
Screen Evidence:

 

ARPC3 involved pathways:

KEGG pathway Description View
hsa04666Fc gamma R-mediated phagocytosis
hsa04810Regulation of actin cytoskeleton
hsa05100Bacterial invasion of epithelial cells
hsa05130Pathogenic Escherichia coli infection
hsa05131Shigellosis
hsa05132Salmonella infection

 

Expression of ARPC3:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 ARPC3 10094 208736_at -0.1031 0.8800
GSE20347 ARPC3 10094 208736_at -0.7123 0.0000
GSE23400 ARPC3 10094 208736_at -0.3765 0.0006
GSE26886 ARPC3 10094 208736_at -0.6702 0.0025
GSE29001 ARPC3 10094 208736_at -0.7890 0.1001
GSE38129 ARPC3 10094 208736_at -0.3224 0.0413
GSE45670 ARPC3 10094 208736_at -0.1250 0.3808
GSE53622 ARPC3 10094 5528 -0.4393 0.0000
GSE53624 ARPC3 10094 5528 -0.4744 0.0000
GSE63941 ARPC3 10094 208736_at 1.5734 0.0001
GSE77861 ARPC3 10094 208736_at -0.6264 0.0067
GSE97050 ARPC3 10094 A_24_P167473 0.1036 0.7966
SRP007169 ARPC3 10094 RNAseq -1.5571 0.0000
SRP008496 ARPC3 10094 RNAseq -1.5233 0.0000
SRP064894 ARPC3 10094 RNAseq -0.4891 0.0066
SRP133303 ARPC3 10094 RNAseq -0.2366 0.0761
SRP159526 ARPC3 10094 RNAseq -0.6867 0.0245
SRP193095 ARPC3 10094 RNAseq -0.9128 0.0000
SRP219564 ARPC3 10094 RNAseq -0.7459 0.0436
TCGA ARPC3 10094 RNAseq 0.1602 0.0012

Upregulated datasets: 1; Downregulated datasets: 2.  


 

Survival by ARPC3 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of ARPC3:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 ARPC3 10094 5 3 22
GSE20123 ARPC3 10094 5 3 22
GSE43470 ARPC3 10094 2 1 40
GSE46452 ARPC3 10094 9 1 49
GSE47630 ARPC3 10094 9 3 28
GSE54993 ARPC3 10094 0 5 65
GSE54994 ARPC3 10094 4 3 46
GSE60625 ARPC3 10094 0 0 11
GSE74703 ARPC3 10094 2 0 34
GSE74704 ARPC3 10094 2 2 16
TCGA ARPC3 10094 22 10 64

Total number of gains: 60; Total number of losses: 31; Total Number of normals: 397.  


 

Somatic mutations of ARPC3:

 

Generating mutation plots.

 

Highly correlated genes for ARPC3:

 

Showing top 20/1377 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
ARPC3IRX30.772053404
ARPC3RASSF50.750372707
ARPC3EBPL0.749889404
ARPC3TYSND10.745727404
ARPC3SPIN40.741626303
ARPC3RPL190.740556303
ARPC3VAMP80.7386712011
ARPC3MITD10.734148303
ARPC3NUAK20.733107303
ARPC3VPS250.727235707
ARPC3TP53RK0.726959303
ARPC3MPZL20.72475712012
ARPC3ARHGAP270.723334808
ARPC3IL10RB0.72129710010
ARPC3RAB250.71799113011
ARPC3DHCR240.71303511011
ARPC3TAB30.712375707
ARPC3ARPC1A0.712164404
ARPC3TSPO0.71041111010
ARPC3MARVELD20.70883504

For details and further investigation, click here