POLK

 

Full name: DNA polymerase kappa Alias Symbol: POLQ|DINP
Type: protein-coding gene Cytoband: 5q13.3
Entrez ID: 51426 HGNC ID: HGNC:9183 Ensembl Gene: ENSG00000122008 OMIM ID: 605650
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of POLK:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 POLK 51426 223261_at -0.5468 0.3436
GSE26886 POLK 51426 223260_s_at 0.0595 0.7835
GSE45670 POLK 51426 223261_at -0.5652 0.0001
GSE53622 POLK 51426 23968 -0.4443 0.0000
GSE53624 POLK 51426 149284 -0.3087 0.0000
GSE63941 POLK 51426 223261_at -0.5580 0.2887
GSE77861 POLK 51426 223260_s_at 0.0216 0.9077
GSE97050 POLK 51426 A_23_P386450 -0.0854 0.6892
SRP007169 POLK 51426 RNAseq 0.8822 0.0619
SRP008496 POLK 51426 RNAseq 0.8382 0.0067
SRP064894 POLK 51426 RNAseq -0.1778 0.5235
SRP133303 POLK 51426 RNAseq -0.0651 0.6769
SRP159526 POLK 51426 RNAseq -0.3670 0.3387
SRP193095 POLK 51426 RNAseq -0.1239 0.1334
SRP219564 POLK 51426 RNAseq -0.1830 0.5845
TCGA POLK 51426 RNAseq -0.2032 0.0003

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by POLK expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of POLK:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 POLK 51426 1 13 16
GSE20123 POLK 51426 1 13 16
GSE43470 POLK 51426 1 13 29
GSE46452 POLK 51426 0 28 31
GSE47630 POLK 51426 1 19 20
GSE54993 POLK 51426 8 1 61
GSE54994 POLK 51426 1 19 33
GSE60625 POLK 51426 0 0 11
GSE74703 POLK 51426 1 9 26
GSE74704 POLK 51426 1 6 13
TCGA POLK 51426 3 51 42

Total number of gains: 18; Total number of losses: 172; Total Number of normals: 298.  


 

Somatic mutations of POLK:

 

Generating mutation plots.

 

Highly correlated genes for POLK:

 

Showing top 20/561 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
POLKLRCH30.824928303
POLKRAPGEF20.746857303
POLKSAP30L0.745162303
POLKPIK3R10.743487404
POLKTNFSF120.740293303
POLKHERC10.737889303
POLKFNBP10.730726303
POLKTSHZ10.723528303
POLKITIH50.723438303
POLKSEPSECS0.720992303
POLKNR3C20.719488303
POLKRNF1460.719039404
POLKZBTB160.717619303
POLKRNLS0.716335303
POLKZNF6150.715206404
POLKNSA20.713679606
POLKST6GALNAC60.712805303
POLKBTF30.711671403
POLKGAB10.710409303
POLKGIMAP10.706331404

For details and further investigation, click here