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Backtrace:

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File: /data/webapp/var/www/html/ESCCdb/application/controllers/Result_pages.php
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File: /data/webapp/var/www/html/ESCCdb/application/controllers/Result_pages.php
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Multi-Omics Database of ESCC

 

PPFIBP2

 

Full name: PPFIA binding protein 2 Alias Symbol: Cclp1
Type: protein-coding gene Cytoband: 11p15.4
Entrez ID: 8495 HGNC ID: HGNC:9250 Ensembl Gene: ENSG00000166387 OMIM ID: 603142
Drug and gene relationship at DGIdb

 

Expression of PPFIBP2:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 PPFIBP2 8495 212841_s_at -0.7916 0.2087
GSE20347 PPFIBP2 8495 212841_s_at -1.5066 0.0000
GSE23400 PPFIBP2 8495 212841_s_at -0.8037 0.0000
GSE26886 PPFIBP2 8495 212841_s_at -1.2409 0.0022
GSE29001 PPFIBP2 8495 212841_s_at -1.3386 0.0097
GSE38129 PPFIBP2 8495 212841_s_at -1.1769 0.0000
GSE45670 PPFIBP2 8495 212841_s_at -0.4784 0.0754
GSE53622 PPFIBP2 8495 43079 -1.1122 0.0000
GSE53624 PPFIBP2 8495 43079 -1.5064 0.0000
GSE63941 PPFIBP2 8495 212841_s_at 0.2578 0.7749
GSE77861 PPFIBP2 8495 212841_s_at -0.8592 0.0372
GSE97050 PPFIBP2 8495 A_23_P409623 -0.2235 0.5259
SRP007169 PPFIBP2 8495 RNAseq -2.0130 0.0000
SRP008496 PPFIBP2 8495 RNAseq -1.8788 0.0000
SRP064894 PPFIBP2 8495 RNAseq -1.3308 0.0000
SRP133303 PPFIBP2 8495 RNAseq -0.9167 0.0023
SRP159526 PPFIBP2 8495 RNAseq -1.0821 0.0000
SRP193095 PPFIBP2 8495 RNAseq -1.1540 0.0000
SRP219564 PPFIBP2 8495 RNAseq -1.3162 0.0114
TCGA PPFIBP2 8495 RNAseq -0.4407 0.0000

Upregulated datasets: 0; Downregulated datasets: 12.  


 

Survival by PPFIBP2 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of PPFIBP2:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 PPFIBP2 8495 0 11 19
GSE20123 PPFIBP2 8495 0 11 19
GSE43470 PPFIBP2 8495 1 8 34
GSE46452 PPFIBP2 8495 7 8 44
GSE47630 PPFIBP2 8495 2 12 26
GSE54993 PPFIBP2 8495 3 1 66
GSE54994 PPFIBP2 8495 2 12 39
GSE60625 PPFIBP2 8495 0 0 11
GSE74703 PPFIBP2 8495 1 6 29
GSE74704 PPFIBP2 8495 0 9 11
TCGA PPFIBP2 8495 9 37 50

Total number of gains: 25; Total number of losses: 115; Total Number of normals: 348.  


 

Somatic mutations of PPFIBP2:

 

Generating mutation plots.

 

Highly correlated genes for PPFIBP2:

 

Showing top 20/1627 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
PPFIBP2LRRC280.791783303
PPFIBP2SLC10A50.79049303
PPFIBP2ULK30.781897707
PPFIBP2ZNF8230.776377707
PPFIBP2MYO5B0.77597606
PPFIBP2GALNT120.77288511011
PPFIBP2ARHGAP270.772297707
PPFIBP2EPS150.767119404
PPFIBP2KIAA1211L0.766124606
PPFIBP2HDHD20.766117404
PPFIBP2CCNYL10.765965504
PPFIBP2MANSC10.76451511011
PPFIBP2UBL30.76042210010
PPFIBP2RNF1410.75800911011
PPFIBP2BLNK0.75635111011
PPFIBP2TTC90.75555711011
PPFIBP2SASH10.75470311011
PPFIBP2RAB250.75460111011
PPFIBP2TPRN0.751921404
PPFIBP2SAMD50.748197707

For details and further investigation, click here