PRDX6

 

Full name: peroxiredoxin 6 Alias Symbol: AOP2|KIAA0106|1-Cys|NSGPx|PRX|aiPLA2|MGC46173|p29
Type: protein-coding gene Cytoband: 1q25.1
Entrez ID: 9588 HGNC ID: HGNC:16753 Ensembl Gene: ENSG00000117592 OMIM ID: 602316
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of PRDX6:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 PRDX6 9588 200844_s_at -0.1880 0.4736
GSE20347 PRDX6 9588 200844_s_at -0.4952 0.0025
GSE23400 PRDX6 9588 200844_s_at -0.3874 0.0000
GSE26886 PRDX6 9588 200844_s_at -0.3288 0.1026
GSE29001 PRDX6 9588 200844_s_at -0.5491 0.0223
GSE38129 PRDX6 9588 200844_s_at -0.3239 0.0347
GSE45670 PRDX6 9588 200844_s_at -0.5617 0.0012
GSE53622 PRDX6 9588 69949 -0.7807 0.0000
GSE53624 PRDX6 9588 69949 -0.5008 0.0000
GSE63941 PRDX6 9588 200844_s_at 0.0733 0.8041
GSE77861 PRDX6 9588 200844_s_at -0.4428 0.1089
GSE97050 PRDX6 A_21_P0012646 -0.7668 0.0828
SRP007169 PRDX6 9588 RNAseq -2.1642 0.0000
SRP008496 PRDX6 9588 RNAseq -1.5365 0.0000
SRP064894 PRDX6 9588 RNAseq -0.7150 0.0021
SRP133303 PRDX6 9588 RNAseq -0.6826 0.0000
SRP159526 PRDX6 9588 RNAseq -0.0753 0.7873
SRP193095 PRDX6 9588 RNAseq -0.9239 0.0000
SRP219564 PRDX6 9588 RNAseq -0.2957 0.3925
TCGA PRDX6 9588 RNAseq -0.0296 0.5188

Upregulated datasets: 0; Downregulated datasets: 2.  


 

Survival by PRDX6 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of PRDX6:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 PRDX6 9588 12 0 18
GSE20123 PRDX6 9588 12 0 18
GSE43470 PRDX6 9588 7 2 34
GSE46452 PRDX6 9588 3 1 55
GSE47630 PRDX6 9588 14 0 26
GSE54993 PRDX6 9588 0 6 64
GSE54994 PRDX6 9588 15 0 38
GSE60625 PRDX6 9588 0 0 11
GSE74703 PRDX6 9588 7 2 27
GSE74704 PRDX6 9588 5 0 15
TCGA PRDX6 9588 41 4 51

Total number of gains: 116; Total number of losses: 15; Total Number of normals: 357.  


 

Somatic mutations of PRDX6:

 

Generating mutation plots.

 

Highly correlated genes for PRDX6:

 

Showing top 20/1004 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
PRDX6FNBP10.720854303
PRDX6HEATR5A0.719743303
PRDX6AMBRA10.698966303
PRDX6WDR260.68545610010
PRDX6FCHO20.683885606
PRDX6HERPUD20.677765303
PRDX6ZNF8790.675058403
PRDX6MRPS360.667096605
PRDX6INS0.66327303
PRDX6PEPD0.66251404
PRDX6C4orf30.658877505
PRDX6ALKBH70.658219605
PRDX6UBL50.655314605
PRDX6ZSWIM60.655059504
PRDX6KCTD60.652764605
PRDX6HINT30.651516404
PRDX6BRK10.649727504
PRDX6ZFP36L10.649094303
PRDX6AP3S10.64839605
PRDX6YTHDF20.647509303

For details and further investigation, click here