| Full name: RAD23 homolog B, nucleotide excision repair protein | Alias Symbol: HHR23B|P58|HR23B | ||
| Type: protein-coding gene | Cytoband: 9q31.2 | ||
| Entrez ID: 5887 | HGNC ID: HGNC:9813 | Ensembl Gene: ENSG00000119318 | OMIM ID: 600062 |
| Drug and gene relationship at DGIdb | |||
Expression of RAD23B:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | RAD23B | 5887 | 201222_s_at | -0.1986 | 0.5204 | |
| GSE20347 | RAD23B | 5887 | 201223_s_at | -0.3276 | 0.0274 | |
| GSE23400 | RAD23B | 5887 | 201222_s_at | 0.0865 | 0.3738 | |
| GSE26886 | RAD23B | 5887 | 201222_s_at | -0.7971 | 0.0002 | |
| GSE29001 | RAD23B | 5887 | 201223_s_at | -0.0605 | 0.8142 | |
| GSE38129 | RAD23B | 5887 | 201223_s_at | -0.1299 | 0.2645 | |
| GSE45670 | RAD23B | 5887 | 201222_s_at | 0.0657 | 0.5420 | |
| GSE53622 | RAD23B | 5887 | 50138 | -0.0808 | 0.1872 | |
| GSE53624 | RAD23B | 5887 | 50138 | 0.3109 | 0.0000 | |
| GSE63941 | RAD23B | 5887 | 201222_s_at | 1.6929 | 0.0000 | |
| GSE77861 | RAD23B | 5887 | 201222_s_at | -0.1454 | 0.5558 | |
| GSE97050 | RAD23B | 5887 | A_33_P3312039 | -0.0328 | 0.9294 | |
| SRP007169 | RAD23B | 5887 | RNAseq | 0.6984 | 0.0436 | |
| SRP008496 | RAD23B | 5887 | RNAseq | 0.5461 | 0.0065 | |
| SRP064894 | RAD23B | 5887 | RNAseq | -0.0800 | 0.6498 | |
| SRP133303 | RAD23B | 5887 | RNAseq | 0.0738 | 0.6290 | |
| SRP159526 | RAD23B | 5887 | RNAseq | -0.3511 | 0.1116 | |
| SRP193095 | RAD23B | 5887 | RNAseq | -0.1212 | 0.4037 | |
| SRP219564 | RAD23B | 5887 | RNAseq | -0.4014 | 0.0400 | |
| TCGA | RAD23B | 5887 | RNAseq | 0.1486 | 0.0007 |
Upregulated datasets: 1; Downregulated datasets: 0.
Survival by RAD23B expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of RAD23B:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | RAD23B | 5887 | 4 | 9 | 17 | |
| GSE20123 | RAD23B | 5887 | 5 | 8 | 17 | |
| GSE43470 | RAD23B | 5887 | 7 | 3 | 33 | |
| GSE46452 | RAD23B | 5887 | 6 | 13 | 40 | |
| GSE47630 | RAD23B | 5887 | 1 | 17 | 22 | |
| GSE54993 | RAD23B | 5887 | 3 | 3 | 64 | |
| GSE54994 | RAD23B | 5887 | 9 | 10 | 34 | |
| GSE60625 | RAD23B | 5887 | 0 | 0 | 11 | |
| GSE74703 | RAD23B | 5887 | 6 | 3 | 27 | |
| GSE74704 | RAD23B | 5887 | 2 | 6 | 12 | |
| TCGA | RAD23B | 5887 | 26 | 21 | 49 |
Total number of gains: 69; Total number of losses: 93; Total Number of normals: 326.
Somatic mutations of RAD23B:
Generating mutation plots.
Highly correlated genes for RAD23B:
Showing top 20/499 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| RAD23B | MTA3 | 0.806342 | 3 | 0 | 3 |
| RAD23B | TRERF1 | 0.798224 | 3 | 0 | 3 |
| RAD23B | MPZL3 | 0.77022 | 4 | 0 | 4 |
| RAD23B | ULK3 | 0.766351 | 3 | 0 | 3 |
| RAD23B | PADI1 | 0.750555 | 3 | 0 | 3 |
| RAD23B | MALT1 | 0.747484 | 3 | 0 | 3 |
| RAD23B | GPS2 | 0.746487 | 3 | 0 | 3 |
| RAD23B | TRIM6 | 0.741717 | 3 | 0 | 3 |
| RAD23B | CNOT10 | 0.734074 | 3 | 0 | 3 |
| RAD23B | PLEKHG1 | 0.72571 | 3 | 0 | 3 |
| RAD23B | LDHD | 0.71778 | 3 | 0 | 3 |
| RAD23B | SLC12A6 | 0.717693 | 4 | 0 | 3 |
| RAD23B | LAMP2 | 0.715771 | 4 | 0 | 3 |
| RAD23B | NRARP | 0.715409 | 3 | 0 | 3 |
| RAD23B | SEMA4A | 0.714698 | 3 | 0 | 3 |
| RAD23B | REPS1 | 0.71311 | 3 | 0 | 3 |
| RAD23B | ATG13 | 0.71304 | 4 | 0 | 4 |
| RAD23B | RPS6KB1 | 0.712602 | 4 | 0 | 4 |
| RAD23B | FAM71F2 | 0.710585 | 3 | 0 | 3 |
| RAD23B | GRIA4 | 0.707831 | 3 | 0 | 3 |
For details and further investigation, click here
