| Full name: cms1 ribosomal small subunit homolog | Alias Symbol: MGC4308 | ||
| Type: protein-coding gene | Cytoband: 3q12.1 | ||
| Entrez ID: 84319 | HGNC ID: HGNC:28666 | Ensembl Gene: ENSG00000184220 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of CMSS1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | CMSS1 | 84319 | 224523_s_at | 1.0716 | 0.0445 | |
| GSE26886 | CMSS1 | 84319 | 224523_s_at | 2.2647 | 0.0000 | |
| GSE45670 | CMSS1 | 84319 | 224523_s_at | 0.9786 | 0.0003 | |
| GSE53622 | CMSS1 | 84319 | 49113 | 1.1621 | 0.0000 | |
| GSE53624 | CMSS1 | 84319 | 49113 | 1.6638 | 0.0000 | |
| GSE63941 | CMSS1 | 84319 | 224523_s_at | 1.8899 | 0.0030 | |
| GSE77861 | CMSS1 | 84319 | 224523_s_at | 1.1351 | 0.0009 | |
| SRP007169 | CMSS1 | 84319 | RNAseq | 2.0568 | 0.0018 | |
| SRP008496 | CMSS1 | 84319 | RNAseq | 2.8037 | 0.0000 | |
| SRP064894 | CMSS1 | 84319 | RNAseq | 1.1762 | 0.0001 | |
| SRP133303 | CMSS1 | 84319 | RNAseq | 0.4469 | 0.0004 | |
| SRP159526 | CMSS1 | 84319 | RNAseq | 1.4781 | 0.0001 | |
| SRP193095 | CMSS1 | 84319 | RNAseq | 0.8228 | 0.0000 | |
| SRP219564 | CMSS1 | 84319 | RNAseq | 1.3953 | 0.0001 |
Upregulated datasets: 11; Downregulated datasets: 0.
Survival by CMSS1 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of CMSS1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | CMSS1 | 84319 | 18 | 1 | 11 | |
| GSE20123 | CMSS1 | 84319 | 17 | 1 | 12 | |
| GSE43470 | CMSS1 | 84319 | 19 | 1 | 23 | |
| GSE46452 | CMSS1 | 84319 | 12 | 6 | 41 | |
| GSE47630 | CMSS1 | 84319 | 16 | 6 | 18 | |
| GSE54993 | CMSS1 | 84319 | 2 | 5 | 63 | |
| GSE54994 | CMSS1 | 84319 | 27 | 5 | 21 | |
| GSE60625 | CMSS1 | 84319 | 0 | 6 | 5 | |
| GSE74703 | CMSS1 | 84319 | 15 | 1 | 20 | |
| GSE74704 | CMSS1 | 84319 | 14 | 1 | 5 | |
| TCGA | CMSS1 | 84319 | 50 | 9 | 37 |
Total number of gains: 190; Total number of losses: 42; Total Number of normals: 256.
Somatic mutations of CMSS1:
Generating mutation plots.
Highly correlated genes for CMSS1:
Showing top 20/1850 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| CMSS1 | RUVBL1 | 0.833613 | 7 | 0 | 7 |
| CMSS1 | COLGALT1 | 0.833597 | 6 | 0 | 6 |
| CMSS1 | PLXNA1 | 0.819878 | 6 | 0 | 6 |
| CMSS1 | MET | 0.816474 | 5 | 0 | 5 |
| CMSS1 | UHRF1 | 0.806947 | 6 | 0 | 6 |
| CMSS1 | U2SURP | 0.800597 | 5 | 0 | 5 |
| CMSS1 | FUS | 0.79939 | 6 | 0 | 6 |
| CMSS1 | PSME4 | 0.795895 | 6 | 0 | 6 |
| CMSS1 | CKS1B | 0.791384 | 7 | 0 | 7 |
| CMSS1 | SPAG5 | 0.791317 | 6 | 0 | 6 |
| CMSS1 | MYBL2 | 0.790326 | 7 | 0 | 7 |
| CMSS1 | HMGB3 | 0.789444 | 6 | 0 | 6 |
| CMSS1 | MRPL47 | 0.789125 | 7 | 0 | 7 |
| CMSS1 | MLF1 | 0.787412 | 6 | 0 | 6 |
| CMSS1 | ACLY | 0.786125 | 6 | 0 | 6 |
| CMSS1 | NUDT1 | 0.784879 | 6 | 0 | 6 |
| CMSS1 | RFC4 | 0.783232 | 7 | 0 | 7 |
| CMSS1 | ACTL6A | 0.78236 | 7 | 0 | 7 |
| CMSS1 | RPN1 | 0.782011 | 5 | 0 | 5 |
| CMSS1 | MCM2 | 0.780957 | 7 | 0 | 7 |
For details and further investigation, click here
