| Full name: RCAN family member 3 | Alias Symbol: | ||
| Type: protein-coding gene | Cytoband: 1p36.11 | ||
| Entrez ID: 11123 | HGNC ID: HGNC:3042 | Ensembl Gene: ENSG00000117602 | OMIM ID: 605860 |
| Drug and gene relationship at DGIdb | |||
Expression of RCAN3:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | RCAN3 | 11123 | 226272_at | -0.0787 | 0.9422 | |
| GSE20347 | RCAN3 | 11123 | 219864_s_at | -0.2079 | 0.0043 | |
| GSE23400 | RCAN3 | 11123 | 219864_s_at | -0.0952 | 0.0001 | |
| GSE26886 | RCAN3 | 11123 | 226272_at | -1.5362 | 0.0000 | |
| GSE29001 | RCAN3 | 11123 | 219864_s_at | -0.1138 | 0.4040 | |
| GSE38129 | RCAN3 | 11123 | 219864_s_at | -0.0521 | 0.6497 | |
| GSE45670 | RCAN3 | 11123 | 226272_at | -0.2273 | 0.3285 | |
| GSE53622 | RCAN3 | 11123 | 105420 | -0.6095 | 0.0000 | |
| GSE53624 | RCAN3 | 11123 | 51129 | -0.1560 | 0.0090 | |
| GSE63941 | RCAN3 | 11123 | 226272_at | -0.0619 | 0.9414 | |
| GSE77861 | RCAN3 | 11123 | 226272_at | -1.0289 | 0.0156 | |
| GSE97050 | RCAN3 | 11123 | A_23_P35205 | -0.2225 | 0.5340 | |
| SRP007169 | RCAN3 | 11123 | RNAseq | -1.2642 | 0.0006 | |
| SRP008496 | RCAN3 | 11123 | RNAseq | -1.3656 | 0.0000 | |
| SRP064894 | RCAN3 | 11123 | RNAseq | -0.6781 | 0.0020 | |
| SRP133303 | RCAN3 | 11123 | RNAseq | -0.2897 | 0.1778 | |
| SRP159526 | RCAN3 | 11123 | RNAseq | -0.4818 | 0.0950 | |
| SRP193095 | RCAN3 | 11123 | RNAseq | -0.8244 | 0.0000 | |
| SRP219564 | RCAN3 | 11123 | RNAseq | -1.1597 | 0.0572 | |
| TCGA | RCAN3 | 11123 | RNAseq | -0.1040 | 0.1524 |
Upregulated datasets: 0; Downregulated datasets: 4.
Survival by RCAN3 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of RCAN3:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | RCAN3 | 11123 | 0 | 5 | 25 | |
| GSE20123 | RCAN3 | 11123 | 0 | 4 | 26 | |
| GSE43470 | RCAN3 | 11123 | 2 | 6 | 35 | |
| GSE46452 | RCAN3 | 11123 | 5 | 1 | 53 | |
| GSE47630 | RCAN3 | 11123 | 8 | 3 | 29 | |
| GSE54993 | RCAN3 | 11123 | 2 | 1 | 67 | |
| GSE54994 | RCAN3 | 11123 | 11 | 4 | 38 | |
| GSE60625 | RCAN3 | 11123 | 0 | 0 | 11 | |
| GSE74703 | RCAN3 | 11123 | 1 | 4 | 31 | |
| GSE74704 | RCAN3 | 11123 | 0 | 0 | 20 | |
| TCGA | RCAN3 | 11123 | 10 | 23 | 63 |
Total number of gains: 39; Total number of losses: 51; Total Number of normals: 398.
Somatic mutations of RCAN3:
Generating mutation plots.
Highly correlated genes for RCAN3:
Showing top 20/1135 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| RCAN3 | SYPL1 | 0.764846 | 3 | 0 | 3 |
| RCAN3 | PUS7L | 0.749893 | 3 | 0 | 3 |
| RCAN3 | SLC25A40 | 0.740773 | 3 | 0 | 3 |
| RCAN3 | EXOC4 | 0.730599 | 3 | 0 | 3 |
| RCAN3 | PANK1 | 0.730482 | 5 | 0 | 4 |
| RCAN3 | EXD2 | 0.728243 | 3 | 0 | 3 |
| RCAN3 | NHP2 | 0.719036 | 5 | 0 | 4 |
| RCAN3 | TMEM120A | 0.717679 | 5 | 0 | 5 |
| RCAN3 | PRMT6 | 0.714412 | 3 | 0 | 3 |
| RCAN3 | SUFU | 0.711202 | 4 | 0 | 3 |
| RCAN3 | ITPRIPL2 | 0.70975 | 3 | 0 | 3 |
| RCAN3 | PRDX5 | 0.707303 | 4 | 0 | 4 |
| RCAN3 | ZBTB1 | 0.706729 | 3 | 0 | 3 |
| RCAN3 | PDIK1L | 0.706723 | 6 | 0 | 6 |
| RCAN3 | TPRN | 0.706141 | 3 | 0 | 3 |
| RCAN3 | IFT46 | 0.705219 | 3 | 0 | 3 |
| RCAN3 | PEX11B | 0.69864 | 8 | 0 | 7 |
| RCAN3 | C6orf120 | 0.698312 | 3 | 0 | 3 |
| RCAN3 | MRFAP1L1 | 0.696654 | 3 | 0 | 3 |
| RCAN3 | PITHD1 | 0.695535 | 6 | 0 | 5 |
For details and further investigation, click here
