TMEM120A

 

Full name: transmembrane protein 120A Alias Symbol: TMPIT|NET29
Type: protein-coding gene Cytoband: 7q11.23
Entrez ID: 83862 HGNC ID: HGNC:21697 Ensembl Gene: ENSG00000189077 OMIM ID: 616550
Drug and gene relationship at DGIdb

 

Expression of TMEM120A:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 TMEM120A 83862 223482_at -0.1782 0.7541
GSE26886 TMEM120A 83862 223482_at -0.6453 0.0000
GSE45670 TMEM120A 83862 223482_at -0.3853 0.0043
GSE53622 TMEM120A 83862 22740 -0.9121 0.0000
GSE53624 TMEM120A 83862 22740 -0.9595 0.0000
GSE63941 TMEM120A 83862 223482_at -1.1903 0.0178
GSE77861 TMEM120A 83862 223482_at -0.7470 0.0087
GSE97050 TMEM120A 83862 A_23_P259632 -0.1834 0.3989
SRP007169 TMEM120A 83862 RNAseq -2.5976 0.0000
SRP008496 TMEM120A 83862 RNAseq -2.0567 0.0000
SRP064894 TMEM120A 83862 RNAseq -0.4181 0.1550
SRP133303 TMEM120A 83862 RNAseq -0.8546 0.0000
SRP159526 TMEM120A 83862 RNAseq -1.1633 0.0000
SRP193095 TMEM120A 83862 RNAseq -0.9434 0.0000
SRP219564 TMEM120A 83862 RNAseq -0.4280 0.1926
TCGA TMEM120A 83862 RNAseq -0.2602 0.0000

Upregulated datasets: 0; Downregulated datasets: 4.  


 

Survival by TMEM120A expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of TMEM120A:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 TMEM120A 83862 14 1 15
GSE20123 TMEM120A 83862 14 1 15
GSE43470 TMEM120A 83862 3 2 38
GSE46452 TMEM120A 83862 12 0 47
GSE47630 TMEM120A 83862 7 2 31
GSE54993 TMEM120A 83862 2 7 61
GSE54994 TMEM120A 83862 14 3 36
GSE60625 TMEM120A 83862 0 0 11
GSE74703 TMEM120A 83862 3 1 32
GSE74704 TMEM120A 83862 8 1 11
TCGA TMEM120A 83862 44 5 47

Total number of gains: 121; Total number of losses: 23; Total Number of normals: 344.  


 

Somatic mutations of TMEM120A:

 

Generating mutation plots.

 

Highly correlated genes for TMEM120A:

 

Showing top 20/1369 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
TMEM120APIK3CB0.807836303
TMEM120AOSBPL80.778199303
TMEM120AMTF10.772341606
TMEM120ADUSP220.771069606
TMEM120AGPR1080.76652303
TMEM120AHBP10.758756404
TMEM120ACCNDBP10.758001505
TMEM120ARABEP20.757669404
TMEM120ATBC1D22B0.755702605
TMEM120AGGA30.752348505
TMEM120ABLVRB0.750708505
TMEM120APLEKHA70.750591707
TMEM120AAPEH0.747048505
TMEM120ACHCHD10.746645404
TMEM120AZFAND2B0.746249807
TMEM120AARHGEF60.741487303
TMEM120ARAB5B0.738501706
TMEM120ASETD40.737991303
TMEM120AMFSD60.736825606
TMEM120AZNF930.73485303

For details and further investigation, click here