| Full name: RFPL1 antisense RNA 1 | Alias Symbol: RFPL1-AS|NCRNA00006 | ||
| Type: non-coding RNA | Cytoband: 22q12.2 | ||
| Entrez ID: 10740 | HGNC ID: HGNC:9978 | Ensembl Gene: ENSG00000225465 | OMIM ID: 605972 |
| Drug and gene relationship at DGIdb | |||
Expression of RFPL1S:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | RFPL1S | 10740 | 214120_at | 0.0405 | 0.8470 | |
| GSE20347 | RFPL1S | 10740 | 214120_at | 0.0291 | 0.5818 | |
| GSE23400 | RFPL1S | 10740 | 214120_at | 0.0004 | 0.9830 | |
| GSE26886 | RFPL1S | 10740 | 214120_at | -0.0940 | 0.3038 | |
| GSE29001 | RFPL1S | 10740 | 214120_at | 0.0342 | 0.7726 | |
| GSE38129 | RFPL1S | 10740 | 214120_at | 0.0179 | 0.7932 | |
| GSE45670 | RFPL1S | 10740 | 214120_at | -0.0539 | 0.4811 | |
| GSE53622 | RFPL1S | 10740 | 86682 | 0.0645 | 0.5528 | |
| GSE53624 | RFPL1S | 10740 | 86682 | -0.1359 | 0.2348 | |
| GSE63941 | RFPL1S | 10740 | 214120_at | -0.0447 | 0.8115 | |
| GSE77861 | RFPL1S | 10740 | 214120_at | -0.0412 | 0.6186 | |
| SRP007169 | RFPL1S | 10740 | RNAseq | 1.2508 | 0.1931 | |
| SRP133303 | RFPL1S | 10740 | RNAseq | 0.0439 | 0.7833 | |
| SRP159526 | RFPL1S | 10740 | RNAseq | 0.1958 | 0.7540 | |
| SRP193095 | RFPL1S | 10740 | RNAseq | 0.1998 | 0.2275 | |
| SRP219564 | RFPL1S | 10740 | RNAseq | 0.0738 | 0.8523 | |
| TCGA | RFPL1S | 10740 | RNAseq | 0.3110 | 0.5587 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by RFPL1S expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of RFPL1S:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | RFPL1S | 10740 | 3 | 5 | 22 | |
| GSE20123 | RFPL1S | 10740 | 3 | 4 | 23 | |
| GSE43470 | RFPL1S | 10740 | 4 | 5 | 34 | |
| GSE46452 | RFPL1S | 10740 | 31 | 1 | 27 | |
| GSE47630 | RFPL1S | 10740 | 8 | 5 | 27 | |
| GSE54993 | RFPL1S | 10740 | 3 | 6 | 61 | |
| GSE54994 | RFPL1S | 10740 | 11 | 8 | 34 | |
| GSE60625 | RFPL1S | 10740 | 5 | 0 | 6 | |
| GSE74703 | RFPL1S | 10740 | 4 | 4 | 28 | |
| GSE74704 | RFPL1S | 10740 | 0 | 1 | 19 | |
| TCGA | RFPL1S | 10740 | 27 | 16 | 53 |
Total number of gains: 99; Total number of losses: 55; Total Number of normals: 334.
Somatic mutations of RFPL1S:
Generating mutation plots.
Highly correlated genes for RFPL1S:
Showing top 20/37 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| RFPL1S | ASRGL1 | 0.695603 | 3 | 0 | 3 |
| RFPL1S | PLA2G2D | 0.686536 | 3 | 0 | 3 |
| RFPL1S | SYCE1 | 0.685789 | 3 | 0 | 3 |
| RFPL1S | DEFB121 | 0.673136 | 3 | 0 | 3 |
| RFPL1S | CSH1 | 0.672607 | 3 | 0 | 3 |
| RFPL1S | CA6 | 0.658291 | 3 | 0 | 3 |
| RFPL1S | CARD11 | 0.644131 | 3 | 0 | 3 |
| RFPL1S | CELA3A | 0.644126 | 3 | 0 | 3 |
| RFPL1S | TTTY5 | 0.64201 | 3 | 0 | 3 |
| RFPL1S | LHX9 | 0.641103 | 3 | 0 | 3 |
| RFPL1S | TMPO-AS1 | 0.618605 | 3 | 0 | 3 |
| RFPL1S | LRP6 | 0.618081 | 3 | 0 | 3 |
| RFPL1S | DLGAP1-AS1 | 0.606999 | 3 | 0 | 3 |
| RFPL1S | CDIP1 | 0.606094 | 3 | 0 | 3 |
| RFPL1S | INSC | 0.603637 | 3 | 0 | 3 |
| RFPL1S | SLC26A1 | 0.599637 | 4 | 0 | 3 |
| RFPL1S | REN | 0.5996 | 3 | 0 | 3 |
| RFPL1S | DZANK1 | 0.598805 | 4 | 0 | 4 |
| RFPL1S | VHL | 0.598148 | 4 | 0 | 3 |
| RFPL1S | FOXE3 | 0.597638 | 4 | 0 | 3 |
For details and further investigation, click here
