| Full name: RFPL3 antisense | Alias Symbol: RFPL3-AS|NCRNA00005 | ||
| Type: non-coding RNA | Cytoband: 22q12.3 | ||
| Entrez ID: 10737 | HGNC ID: HGNC:9981 | Ensembl Gene: ENSG00000205853 | OMIM ID: 605971 |
| Drug and gene relationship at DGIdb | |||
Expression of RFPL3S:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | RFPL3S | 10737 | 214409_at | 0.2537 | 0.3908 | |
| GSE20347 | RFPL3S | 10737 | 214409_at | 0.1220 | 0.2595 | |
| GSE23400 | RFPL3S | 10737 | 214409_at | 0.0044 | 0.8982 | |
| GSE26886 | RFPL3S | 10737 | 214409_at | 0.0305 | 0.7730 | |
| GSE29001 | RFPL3S | 10737 | 214409_at | 0.3079 | 0.2747 | |
| GSE38129 | RFPL3S | 10737 | 214409_at | 0.0594 | 0.4441 | |
| GSE45670 | RFPL3S | 10737 | 214409_at | 0.1710 | 0.4052 | |
| GSE53622 | RFPL3S | 10737 | 6561 | 0.1287 | 0.1291 | |
| GSE53624 | RFPL3S | 10737 | 6561 | 0.0790 | 0.4386 | |
| GSE63941 | RFPL3S | 10737 | 214409_at | 0.2084 | 0.5449 | |
| GSE77861 | RFPL3S | 10737 | 214409_at | -0.0102 | 0.9244 | |
| TCGA | RFPL3S | 10737 | RNAseq | -0.1904 | 0.6664 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by RFPL3S expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of RFPL3S:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | RFPL3S | 10737 | 4 | 5 | 21 | |
| GSE20123 | RFPL3S | 10737 | 4 | 4 | 22 | |
| GSE43470 | RFPL3S | 10737 | 4 | 5 | 34 | |
| GSE46452 | RFPL3S | 10737 | 31 | 1 | 27 | |
| GSE47630 | RFPL3S | 10737 | 8 | 5 | 27 | |
| GSE54993 | RFPL3S | 10737 | 3 | 6 | 61 | |
| GSE54994 | RFPL3S | 10737 | 10 | 9 | 34 | |
| GSE60625 | RFPL3S | 10737 | 5 | 0 | 6 | |
| GSE74703 | RFPL3S | 10737 | 4 | 5 | 27 | |
| GSE74704 | RFPL3S | 10737 | 1 | 1 | 18 | |
| TCGA | RFPL3S | 10737 | 27 | 15 | 54 |
Total number of gains: 101; Total number of losses: 56; Total Number of normals: 331.
Somatic mutations of RFPL3S:
Generating mutation plots.
Highly correlated genes for RFPL3S:
Showing top 20/66 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| RFPL3S | ZC3H18 | 0.768022 | 3 | 0 | 3 |
| RFPL3S | FBRSL1 | 0.753427 | 3 | 0 | 3 |
| RFPL3S | SLC22A11 | 0.72973 | 3 | 0 | 3 |
| RFPL3S | FAM155B | 0.727387 | 3 | 0 | 3 |
| RFPL3S | TP53AIP1 | 0.696224 | 3 | 0 | 3 |
| RFPL3S | SLC6A3 | 0.687609 | 3 | 0 | 3 |
| RFPL3S | SLC36A4 | 0.674383 | 3 | 0 | 3 |
| RFPL3S | GPSM1 | 0.663247 | 3 | 0 | 3 |
| RFPL3S | MYO15A | 0.661073 | 3 | 0 | 3 |
| RFPL3S | BAALC | 0.659164 | 3 | 0 | 3 |
| RFPL3S | GYPE | 0.652709 | 4 | 0 | 4 |
| RFPL3S | DPF1 | 0.652294 | 3 | 0 | 3 |
| RFPL3S | INSC | 0.649013 | 3 | 0 | 3 |
| RFPL3S | ARTN | 0.648274 | 3 | 0 | 3 |
| RFPL3S | PRR18 | 0.646189 | 3 | 0 | 3 |
| RFPL3S | FKBP4 | 0.644441 | 3 | 0 | 3 |
| RFPL3S | TMPO-AS1 | 0.638751 | 3 | 0 | 3 |
| RFPL3S | MNX1 | 0.637217 | 5 | 0 | 4 |
| RFPL3S | SLC4A2 | 0.634527 | 3 | 0 | 3 |
| RFPL3S | VHL | 0.631824 | 4 | 0 | 3 |
For details and further investigation, click here
