| Full name: RUN domain containing 3A | Alias Symbol: RPIP8|RAP2IP | ||
| Type: protein-coding gene | Cytoband: 17q21.31 | ||
| Entrez ID: 10900 | HGNC ID: HGNC:16984 | Ensembl Gene: ENSG00000108309 | OMIM ID: 605448 |
| Drug and gene relationship at DGIdb | |||
Expression of RUNDC3A:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | RUNDC3A | 10900 | 213439_x_at | 0.0814 | 0.6745 | |
| GSE20347 | RUNDC3A | 10900 | 213439_x_at | 0.1435 | 0.0574 | |
| GSE23400 | RUNDC3A | 10900 | 213439_x_at | -0.0673 | 0.0592 | |
| GSE26886 | RUNDC3A | 10900 | 213439_x_at | 0.2190 | 0.0289 | |
| GSE29001 | RUNDC3A | 10900 | 213439_x_at | 0.0068 | 0.9708 | |
| GSE38129 | RUNDC3A | 10900 | 213439_x_at | 0.1120 | 0.2079 | |
| GSE45670 | RUNDC3A | 10900 | 213439_x_at | 0.1719 | 0.0298 | |
| GSE53622 | RUNDC3A | 10900 | 93500 | 0.8565 | 0.0000 | |
| GSE53624 | RUNDC3A | 10900 | 93500 | 1.1792 | 0.0000 | |
| GSE63941 | RUNDC3A | 10900 | 213439_x_at | 0.1994 | 0.2060 | |
| GSE77861 | RUNDC3A | 10900 | 213439_x_at | 0.1356 | 0.3093 | |
| GSE97050 | RUNDC3A | 10900 | A_24_P91094 | 0.2494 | 0.2489 | |
| SRP133303 | RUNDC3A | 10900 | RNAseq | 1.2050 | 0.0123 | |
| SRP159526 | RUNDC3A | 10900 | RNAseq | 1.7487 | 0.0354 | |
| SRP219564 | RUNDC3A | 10900 | RNAseq | -0.3752 | 0.5343 | |
| TCGA | RUNDC3A | 10900 | RNAseq | 0.2056 | 0.4885 |
Upregulated datasets: 3; Downregulated datasets: 0.
Survival by RUNDC3A expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of RUNDC3A:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | RUNDC3A | 10900 | 5 | 2 | 23 | |
| GSE20123 | RUNDC3A | 10900 | 5 | 2 | 23 | |
| GSE43470 | RUNDC3A | 10900 | 1 | 2 | 40 | |
| GSE46452 | RUNDC3A | 10900 | 32 | 0 | 27 | |
| GSE47630 | RUNDC3A | 10900 | 9 | 0 | 31 | |
| GSE54993 | RUNDC3A | 10900 | 3 | 4 | 63 | |
| GSE54994 | RUNDC3A | 10900 | 8 | 5 | 40 | |
| GSE60625 | RUNDC3A | 10900 | 4 | 0 | 7 | |
| GSE74703 | RUNDC3A | 10900 | 1 | 1 | 34 | |
| GSE74704 | RUNDC3A | 10900 | 3 | 1 | 16 | |
| TCGA | RUNDC3A | 10900 | 23 | 7 | 66 |
Total number of gains: 94; Total number of losses: 24; Total Number of normals: 370.
Somatic mutations of RUNDC3A:
Generating mutation plots.
Highly correlated genes for RUNDC3A:
Showing top 20/826 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| RUNDC3A | STK11 | 0.802979 | 3 | 0 | 3 |
| RUNDC3A | TTR | 0.75565 | 3 | 0 | 3 |
| RUNDC3A | SIGIRR | 0.750157 | 3 | 0 | 3 |
| RUNDC3A | PSPN | 0.744326 | 4 | 0 | 4 |
| RUNDC3A | RAD51D | 0.710336 | 3 | 0 | 3 |
| RUNDC3A | CNOT3 | 0.709473 | 3 | 0 | 3 |
| RUNDC3A | CCDC81 | 0.709409 | 3 | 0 | 3 |
| RUNDC3A | RNF17 | 0.70488 | 4 | 0 | 4 |
| RUNDC3A | SYT13 | 0.701371 | 4 | 0 | 4 |
| RUNDC3A | CC2D1B | 0.700131 | 3 | 0 | 3 |
| RUNDC3A | CLDN14 | 0.700064 | 4 | 0 | 3 |
| RUNDC3A | KCNV1 | 0.698315 | 4 | 0 | 3 |
| RUNDC3A | F2 | 0.694078 | 5 | 0 | 5 |
| RUNDC3A | ZNF221 | 0.689192 | 4 | 0 | 4 |
| RUNDC3A | OR1F1 | 0.689034 | 6 | 0 | 5 |
| RUNDC3A | TMEM102 | 0.688507 | 5 | 0 | 4 |
| RUNDC3A | PAX3 | 0.688044 | 4 | 0 | 4 |
| RUNDC3A | FASTK | 0.685924 | 3 | 0 | 3 |
| RUNDC3A | RPGRIP1 | 0.678144 | 4 | 0 | 3 |
| RUNDC3A | GPD1 | 0.675913 | 4 | 0 | 3 |
For details and further investigation, click here
