STK11

 

Full name: serine/threonine kinase 11 Alias Symbol: PJS|LKB1
Type: protein-coding gene Cytoband: 19p13.3
Entrez ID: 6794 HGNC ID: HGNC:11389 Ensembl Gene: ENSG00000118046 OMIM ID: 602216
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found 14/325 cell lines had fitness change in Project Score.
  • This gene has been idenfitied as a common driver in this paper.
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

STK11 involved pathways:

KEGG pathway Description View
hsa04068FoxO signaling pathway
hsa04150mTOR signaling pathway
hsa04151PI3K-Akt signaling pathway
hsa04152AMPK signaling pathway
hsa04211Longevity regulating pathway - mammal
hsa04920Adipocytokine signaling pathway

 

Expression of STK11:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 STK11 6794 41657_at 0.5411 0.1628
GSE20347 STK11 6794 41657_at -0.0379 0.6742
GSE23400 STK11 6794 41657_at 0.0497 0.1626
GSE26886 STK11 6794 231017_at 0.4751 0.0899
GSE29001 STK11 6794 41657_at -0.3265 0.0360
GSE38129 STK11 6794 41657_at -0.0514 0.5305
GSE45670 STK11 6794 231017_at 0.1338 0.4728
GSE63941 STK11 6794 231017_at -0.3528 0.6255
GSE77861 STK11 6794 41657_at 0.1592 0.3524
GSE97050 STK11 6794 A_33_P3389148 0.0878 0.7209
SRP007169 STK11 6794 RNAseq -0.7088 0.0364
SRP008496 STK11 6794 RNAseq -0.4574 0.0218
SRP064894 STK11 6794 RNAseq 0.3870 0.0808
SRP133303 STK11 6794 RNAseq 0.0112 0.9512
SRP159526 STK11 6794 RNAseq 0.2057 0.3081
SRP193095 STK11 6794 RNAseq 0.1079 0.3186
SRP219564 STK11 6794 RNAseq -0.3291 0.5213
TCGA STK11 6794 RNAseq -0.0507 0.3888

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by STK11 expression:

 

TCGA

 

Note: Click image to view full size file.  


Copy number change of STK11:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 STK11 6794 4 6 20
GSE20123 STK11 6794 4 5 21
GSE43470 STK11 6794 1 11 31
GSE46452 STK11 6794 47 1 11
GSE47630 STK11 6794 5 7 28
GSE54993 STK11 6794 13 4 53
GSE54994 STK11 6794 8 15 30
GSE60625 STK11 6794 9 0 2
GSE74703 STK11 6794 1 8 27
GSE74704 STK11 6794 3 3 14
TCGA STK11 6794 7 25 64

Total number of gains: 102; Total number of losses: 85; Total Number of normals: 301.  


 

Somatic mutations of STK11:

 

Generating mutation plots.

 

Highly correlated genes for STK11:

 

Showing top 20/225 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
STK11CNOT30.84857303
STK11RUNDC3A0.802979303
STK11CDK160.800728303
STK11ZNF6870.794641303
STK11CYP11B10.784708303
STK11TMEM1020.780417303
STK11HRK0.776414303
STK11PPP1R13B0.769423303
STK11C19orf530.758399303
STK11MBD60.756313303
STK11TMUB10.755266403
STK11PYGO20.752099303
STK11SMG50.746246303
STK11ADAM210.7449303
STK11LIM20.744897303
STK11ZNF5000.729898303
STK11GTF2IRD20.729546404
STK11DUSP90.725906303
STK11SCLY0.724927303
STK11FMNL10.724709303

For details and further investigation, click here