SHB

 

Full name: SH2 domain containing adaptor protein B Alias Symbol: 
Type: protein-coding gene Cytoband: 9p13.1
Entrez ID: 6461 HGNC ID: HGNC:10838 Ensembl Gene: ENSG00000107338 OMIM ID: 600314
Drug and gene relationship at DGIdb

 

Expression of SHB:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 SHB 6461 1557458_s_at -0.1993 0.7268
GSE20347 SHB 6461 204656_at -0.4722 0.0015
GSE23400 SHB 6461 204656_at -0.1036 0.0505
GSE26886 SHB 6461 1557458_s_at 0.2272 0.3330
GSE29001 SHB 6461 204656_at -0.2808 0.1672
GSE38129 SHB 6461 204656_at -0.2096 0.0955
GSE45670 SHB 6461 1557458_s_at -0.1133 0.6174
GSE53622 SHB 6461 27519 -0.1988 0.0290
GSE53624 SHB 6461 27519 -0.2754 0.0012
GSE63941 SHB 6461 1557458_s_at 0.0820 0.9167
GSE77861 SHB 6461 204657_s_at -0.4024 0.0929
GSE97050 SHB 6461 A_23_P257743 0.2506 0.4659
SRP007169 SHB 6461 RNAseq -1.1950 0.0115
SRP008496 SHB 6461 RNAseq -0.6599 0.0746
SRP064894 SHB 6461 RNAseq -0.4164 0.0627
SRP133303 SHB 6461 RNAseq -0.4037 0.2429
SRP159526 SHB 6461 RNAseq -0.3487 0.3783
SRP193095 SHB 6461 RNAseq -0.4490 0.0286
SRP219564 SHB 6461 RNAseq -0.5033 0.3290
TCGA SHB 6461 RNAseq 0.1105 0.0803

Upregulated datasets: 0; Downregulated datasets: 1.  


 

Survival by SHB expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of SHB:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 SHB 6461 3 14 13
GSE20123 SHB 6461 3 14 13
GSE43470 SHB 6461 0 14 29
GSE46452 SHB 6461 6 15 38
GSE47630 SHB 6461 1 20 19
GSE54993 SHB 6461 6 0 64
GSE54994 SHB 6461 6 13 34
GSE60625 SHB 6461 0 0 11
GSE74703 SHB 6461 0 10 26
GSE74704 SHB 6461 0 10 10
TCGA SHB 6461 16 44 36

Total number of gains: 41; Total number of losses: 154; Total Number of normals: 293.  


 

Somatic mutations of SHB:

 

Generating mutation plots.

 

Highly correlated genes for SHB:

 

Showing top 20/405 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
SHBLY90.775397303
SHBSUSD10.739718303
SHBSNX150.734997303
SHBCYP2C190.728664303
SHBSCFD20.725378303
SHBQPCTL0.725258303
SHBMAPK110.722929303
SHBHECW20.714245303
SHBRNLS0.714186303
SHBAKR7A20.710954303
SHBCISH0.70534303
SHBPLA2G2A0.702163303
SHBDMBT10.69757303
SHBFAM193B0.693782303
SHBACTR3C0.689146303
SHBUTF10.682751403
SHBOR2F10.681561303
SHBCD3E0.679163303
SHBATP6V1C20.677693303
SHBCLDN110.672657303

For details and further investigation, click here