| Full name: solute carrier family 13 member 3 | Alias Symbol: NADC3|SDCT2 | ||
| Type: protein-coding gene | Cytoband: 20q13.12 | ||
| Entrez ID: 64849 | HGNC ID: HGNC:14430 | Ensembl Gene: ENSG00000158296 | OMIM ID: 606411 |
| Drug and gene relationship at DGIdb | |||
Expression of SLC13A3:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SLC13A3 | 64849 | 205243_at | -0.1482 | 0.6462 | |
| GSE20347 | SLC13A3 | 64849 | 205243_at | -0.0781 | 0.3080 | |
| GSE23400 | SLC13A3 | 64849 | 205243_at | -0.2708 | 0.0000 | |
| GSE26886 | SLC13A3 | 64849 | 230687_at | -0.0772 | 0.5443 | |
| GSE29001 | SLC13A3 | 64849 | 205243_at | -0.3641 | 0.0543 | |
| GSE38129 | SLC13A3 | 64849 | 205243_at | -0.2245 | 0.0112 | |
| GSE45670 | SLC13A3 | 64849 | 205244_s_at | -0.2299 | 0.0119 | |
| GSE53622 | SLC13A3 | 64849 | 115460 | 0.2750 | 0.0263 | |
| GSE53624 | SLC13A3 | 64849 | 115460 | 0.6175 | 0.0000 | |
| GSE63941 | SLC13A3 | 64849 | 205244_s_at | 0.1840 | 0.5071 | |
| GSE77861 | SLC13A3 | 64849 | 205244_s_at | -0.1219 | 0.3776 | |
| GSE97050 | SLC13A3 | 64849 | A_33_P3410484 | 0.4152 | 0.4107 | |
| SRP064894 | SLC13A3 | 64849 | RNAseq | -0.0689 | 0.8637 | |
| SRP133303 | SLC13A3 | 64849 | RNAseq | -0.5563 | 0.1827 | |
| SRP159526 | SLC13A3 | 64849 | RNAseq | -0.8223 | 0.0199 | |
| SRP219564 | SLC13A3 | 64849 | RNAseq | -0.1303 | 0.8445 | |
| TCGA | SLC13A3 | 64849 | RNAseq | -0.9997 | 0.0002 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by SLC13A3 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of SLC13A3:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SLC13A3 | 64849 | 14 | 1 | 15 | |
| GSE20123 | SLC13A3 | 64849 | 14 | 1 | 15 | |
| GSE43470 | SLC13A3 | 64849 | 12 | 1 | 30 | |
| GSE46452 | SLC13A3 | 64849 | 29 | 0 | 30 | |
| GSE47630 | SLC13A3 | 64849 | 24 | 1 | 15 | |
| GSE54993 | SLC13A3 | 64849 | 0 | 18 | 52 | |
| GSE54994 | SLC13A3 | 64849 | 25 | 0 | 28 | |
| GSE60625 | SLC13A3 | 64849 | 0 | 0 | 11 | |
| GSE74703 | SLC13A3 | 64849 | 10 | 1 | 25 | |
| GSE74704 | SLC13A3 | 64849 | 10 | 0 | 10 | |
| TCGA | SLC13A3 | 64849 | 45 | 3 | 48 |
Total number of gains: 183; Total number of losses: 26; Total Number of normals: 279.
Somatic mutations of SLC13A3:
Generating mutation plots.
Highly correlated genes for SLC13A3:
Showing top 20/879 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SLC13A3 | FAHD2A | 0.707209 | 3 | 0 | 3 |
| SLC13A3 | CER1 | 0.706596 | 5 | 0 | 5 |
| SLC13A3 | LEFTY1 | 0.705983 | 5 | 0 | 5 |
| SLC13A3 | TAPT1 | 0.701053 | 4 | 0 | 4 |
| SLC13A3 | PSG1 | 0.694898 | 5 | 0 | 5 |
| SLC13A3 | IFNA5 | 0.692345 | 4 | 0 | 3 |
| SLC13A3 | ATOH1 | 0.691981 | 3 | 0 | 3 |
| SLC13A3 | ADIG | 0.691851 | 3 | 0 | 3 |
| SLC13A3 | PNLIP | 0.691788 | 3 | 0 | 3 |
| SLC13A3 | PLD4 | 0.691317 | 3 | 0 | 3 |
| SLC13A3 | GRM1 | 0.686748 | 4 | 0 | 3 |
| SLC13A3 | KRT38 | 0.682897 | 3 | 0 | 3 |
| SLC13A3 | ASIC2 | 0.675726 | 4 | 0 | 4 |
| SLC13A3 | ASMT | 0.67389 | 4 | 0 | 3 |
| SLC13A3 | FGF23 | 0.673665 | 6 | 0 | 5 |
| SLC13A3 | FCRL2 | 0.670949 | 4 | 0 | 4 |
| SLC13A3 | CLCA1 | 0.670902 | 4 | 0 | 4 |
| SLC13A3 | HOXD12 | 0.670867 | 3 | 0 | 3 |
| SLC13A3 | CCDC87 | 0.667167 | 4 | 0 | 3 |
| SLC13A3 | FGF6 | 0.666962 | 4 | 0 | 4 |
For details and further investigation, click here
