| Full name: solute carrier family 18 member B1 | Alias Symbol: dJ55C23.6 | ||
| Type: protein-coding gene | Cytoband: 6q23.2 | ||
| Entrez ID: 116843 | HGNC ID: HGNC:21573 | Ensembl Gene: ENSG00000146409 | OMIM ID: 613361 |
Screen Evidence:
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Expression of SLC18B1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SLC18B1 | 116843 | 226301_at | -0.1698 | 0.7370 | |
| GSE26886 | SLC18B1 | 116843 | 226301_at | -1.4239 | 0.0000 | |
| GSE45670 | SLC18B1 | 116843 | 226301_at | -0.3671 | 0.1170 | |
| GSE53622 | SLC18B1 | 116843 | 64438 | -0.5607 | 0.0000 | |
| GSE53624 | SLC18B1 | 116843 | 33178 | -0.6730 | 0.0000 | |
| GSE63941 | SLC18B1 | 116843 | 226301_at | -0.4756 | 0.6484 | |
| GSE77861 | SLC18B1 | 116843 | 226301_at | -1.4490 | 0.0042 | |
| SRP007169 | SLC18B1 | 116843 | RNAseq | -0.2783 | 0.5428 | |
| SRP064894 | SLC18B1 | 116843 | RNAseq | -0.3458 | 0.0845 | |
| SRP133303 | SLC18B1 | 116843 | RNAseq | -0.8829 | 0.0007 | |
| SRP159526 | SLC18B1 | 116843 | RNAseq | -0.6584 | 0.0269 | |
| SRP193095 | SLC18B1 | 116843 | RNAseq | -0.6946 | 0.0001 | |
| SRP219564 | SLC18B1 | 116843 | RNAseq | -0.6264 | 0.0689 |
Upregulated datasets: 0; Downregulated datasets: 2.
Survival by SLC18B1 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of SLC18B1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SLC18B1 | 116843 | 3 | 4 | 23 | |
| GSE20123 | SLC18B1 | 116843 | 3 | 3 | 24 | |
| GSE43470 | SLC18B1 | 116843 | 5 | 0 | 38 | |
| GSE46452 | SLC18B1 | 116843 | 2 | 11 | 46 | |
| GSE47630 | SLC18B1 | 116843 | 9 | 4 | 27 | |
| GSE54993 | SLC18B1 | 116843 | 3 | 2 | 65 | |
| GSE54994 | SLC18B1 | 116843 | 9 | 7 | 37 | |
| GSE60625 | SLC18B1 | 116843 | 0 | 1 | 10 | |
| GSE74703 | SLC18B1 | 116843 | 4 | 0 | 32 | |
| GSE74704 | SLC18B1 | 116843 | 1 | 1 | 18 | |
| TCGA | SLC18B1 | 116843 | 11 | 18 | 67 |
Total number of gains: 50; Total number of losses: 51; Total Number of normals: 387.
Somatic mutations of SLC18B1:
Generating mutation plots.
Highly correlated genes for SLC18B1:
Showing top 20/594 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SLC18B1 | EPB41L4A | 0.717393 | 3 | 0 | 3 |
| SLC18B1 | ACVR1B | 0.692223 | 3 | 0 | 3 |
| SLC18B1 | ACAD8 | 0.691889 | 4 | 0 | 3 |
| SLC18B1 | DEPTOR | 0.689481 | 3 | 0 | 3 |
| SLC18B1 | FCGBP | 0.681686 | 3 | 0 | 3 |
| SLC18B1 | TESK2 | 0.678495 | 4 | 0 | 4 |
| SLC18B1 | USP46 | 0.677706 | 5 | 0 | 4 |
| SLC18B1 | PRR15L | 0.674164 | 4 | 0 | 4 |
| SLC18B1 | MTFR1L | 0.672446 | 3 | 0 | 3 |
| SLC18B1 | STT3B | 0.671429 | 4 | 0 | 4 |
| SLC18B1 | ACOX3 | 0.670637 | 6 | 0 | 6 |
| SLC18B1 | RIPK4 | 0.667666 | 3 | 0 | 3 |
| SLC18B1 | ZNF626 | 0.667208 | 3 | 0 | 3 |
| SLC18B1 | RNF32 | 0.666037 | 3 | 0 | 3 |
| SLC18B1 | NT5C2 | 0.655849 | 6 | 0 | 6 |
| SLC18B1 | LMBRD1 | 0.65423 | 5 | 0 | 5 |
| SLC18B1 | MBNL3 | 0.653898 | 6 | 0 | 4 |
| SLC18B1 | TMEM59 | 0.653814 | 5 | 0 | 5 |
| SLC18B1 | SESN1 | 0.650928 | 4 | 0 | 4 |
| SLC18B1 | SCP2 | 0.646547 | 6 | 0 | 5 |
For details and further investigation, click here
